Starting /dee2/code/volunteer_pipeline.sh ERR5262810
    current disk space = 1551232827392
    free memory = 1599031232 
ERR5262810 SRAfilesize
3c145e57ca869d934c5a1037b3bd2599  ERR5262810.sra
ERR5262810.sra file validated
ERR5262810 is paired end
ERR5262810 is conventional basespace
ERR5262810 read1 length is 106-150 nt
##FastQC	0.11.5
>>Basic Statistics	pass
#Measure	Value
Filename	ERR5262810_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4000
Sequences flagged as poor quality	0
Sequence length	106-150
%GC	48
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	36.7695	37.0	37.0	37.0	37.0	37.0
2	36.6695	37.0	37.0	37.0	37.0	37.0
3	36.775	37.0	37.0	37.0	37.0	37.0
4	36.718	37.0	37.0	37.0	37.0	37.0
5	36.7645	37.0	37.0	37.0	37.0	37.0
6	36.728	37.0	37.0	37.0	37.0	37.0
7	36.6905	37.0	37.0	37.0	37.0	37.0
8	36.787	37.0	37.0	37.0	37.0	37.0
9	36.7595	37.0	37.0	37.0	37.0	37.0
10-14	36.7196	37.0	37.0	37.0	37.0	37.0
15-19	36.686099999999996	37.0	37.0	37.0	37.0	37.0
20-24	36.677499999999995	37.0	37.0	37.0	37.0	37.0
25-29	36.6678	37.0	37.0	37.0	37.0	37.0
30-34	36.6389	37.0	37.0	37.0	37.0	37.0
35-39	36.6642	37.0	37.0	37.0	37.0	37.0
40-44	36.61990000000001	37.0	37.0	37.0	37.0	37.0
45-49	36.6354	37.0	37.0	37.0	37.0	37.0
50-54	36.5881	37.0	37.0	37.0	37.0	37.0
55-59	36.604400000000005	37.0	37.0	37.0	37.0	37.0
60-64	36.5525	37.0	37.0	37.0	37.0	37.0
65-69	36.5401	37.0	37.0	37.0	37.0	37.0
70-74	36.5055	37.0	37.0	37.0	37.0	37.0
75-79	36.5545	37.0	37.0	37.0	37.0	37.0
80-84	36.5247	37.0	37.0	37.0	37.0	37.0
85-89	36.5382	37.0	37.0	37.0	37.0	37.0
90-94	36.4621	37.0	37.0	37.0	37.0	37.0
95-99	36.4704	37.0	37.0	37.0	37.0	37.0
100-104	36.5044	37.0	37.0	37.0	37.0	37.0
105-109	36.56673252346764	37.0	37.0	37.0	37.0	37.0
110-114	36.43766930117816	37.0	37.0	37.0	37.0	37.0
115-119	36.49182011982042	37.0	37.0	37.0	37.0	37.0
120-124	36.49679397680944	37.0	37.0	37.0	37.0	37.0
125-129	36.464277126345614	37.0	37.0	37.0	37.0	37.0
130-134	36.438629322696805	37.0	37.0	37.0	37.0	37.0
135-139	36.34990983818214	37.0	37.0	37.0	37.0	37.0
140-144	36.39911616947965	37.0	37.0	37.0	37.0	37.0
145-149	36.32057899384866	37.0	37.0	37.0	37.0	37.0
150	36.20946416144746	37.0	37.0	37.0	37.0	37.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
26	1.0
27	1.0
28	3.0
29	9.0
30	9.0
31	25.0
32	30.0
33	37.0
34	67.0
35	162.0
36	2575.0
37	1081.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	20.575	44.375	2.1	32.95
2	28.342513770655987	22.458688032048073	23.184777165748624	26.01402103154732
3	10.4	28.9	14.249999999999998	46.45
4	24.0	29.525000000000002	25.75	20.724999999999998
5	24.45	27.650000000000002	23.7	24.2
6	21.85	35.35	25.35	17.45
7	18.275	21.775	40.575	19.375
8	19.950000000000003	23.5	29.95	26.6
9	17.75	20.375	37.7	24.175
10-14	25.124999999999996	23.54	26.605	24.73
15-19	22.720000000000002	22.365	28.610000000000003	26.305
20-24	24.52	23.380000000000003	26.834999999999997	25.264999999999997
25-29	22.935	25.235000000000003	26.700000000000003	25.130000000000003
30-34	21.224999999999998	24.73	25.755	28.29
35-39	22.825	26.195	25.590000000000003	25.39
40-44	24.07	24.575	25.61	25.745
45-49	23.135	24.8	25.45	26.615
50-54	23.26	25.72	26.790000000000003	24.23
55-59	26.39	24.365000000000002	25.145	24.099999999999998
60-64	25.215	25.355	26.33	23.1
65-69	27.095000000000002	25.509999999999998	24.89	22.505
70-74	25.21	24.725	26.045	24.02
75-79	27.065	25.069999999999997	25.785000000000004	22.08
80-84	25.735000000000003	26.119999999999997	25.11	23.035
85-89	26.505000000000003	25.595000000000002	24.8	23.1
90-94	25.55	25.900000000000002	25.290000000000003	23.26
95-99	28.17	25.740000000000002	24.240000000000002	21.85
100-104	24.035	27.939999999999998	26.284999999999997	21.740000000000002
105-109	26.264363323692645	24.36488704760416	22.51231142030798	26.85843820839522
110-114	27.09856314595412	30.3629947063272	25.23317368288379	17.30526846483489
115-119	29.515474378488076	29.3505834601725	22.247590055809233	18.88635210553019
120-124	26.78617157490397	35.80025608194622	20.128040973111396	17.285531370038413
125-129	22.37708091366628	32.97199638663053	21.189830945928506	23.461091753774678
130-134	19.26892950391645	30.822454308093995	24.556135770234988	25.35248041775457
135-139	20.809326008307654	26.316494707222297	30.21573093930055	22.658448345169504
140-144	19.641401792991033	27.166530834012498	26.514534093996193	26.677533279000272
145-149	19.814840403482105	31.325134724333285	22.536962829901892	26.323062042282714
150	18.16283924843424	32.84620737647877	29.15796798886569	19.832985386221296
>>END_MODULE
>>Per sequence GC content	fail
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	1.0
29	2.0
30	2.5
31	8.5
32	14.5
33	14.5
34	24.5
35	35.0
36	38.0
37	51.0
38	64.0
39	73.0
40	104.5
41	130.0
42	150.0
43	169.5
44	157.0
45	140.0
46	141.5
47	144.0
48	167.0
49	260.5
50	349.0
51	344.0
52	337.0
53	256.0
54	142.0
55	115.0
56	80.0
57	52.0
58	50.5
59	43.5
60	33.0
61	32.0
62	27.5
63	23.5
64	18.5
65	15.0
66	17.5
67	31.5
68	35.0
69	26.5
70	24.0
71	13.5
72	11.0
73	13.5
74	7.0
75	4.5
76	2.5
77	0.5
78	0.0
79	1.0
80	1.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.15
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.0
25-29	0.0
30-34	0.0
35-39	0.0
40-44	0.0
45-49	0.0
50-54	0.0
55-59	0.0
60-64	0.0
65-69	0.0
70-74	0.0
75-79	0.0
80-84	0.0
85-89	0.0
90-94	0.0
95-99	0.0
100-104	0.0
105-109	0.0
110-114	0.0
115-119	0.0
120-124	0.0
125-129	0.0
130-134	0.0
135-139	0.0
140-144	0.0
145-149	0.0
150	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
106	2399.0
107	2.0
108	6.0
109	0.0
110	4.0
111	4.0
112	1.0
113	1.0
114	1.0
115	2.0
116	2.0
117	4.0
118	4.0
119	5.0
120	0.0
121	2.0
122	2.0
123	5.0
124	1.0
125	3.0
126	0.0
127	3.0
128	8.0
129	2.0
130	1.0
131	6.0
132	3.0
133	7.0
134	15.0
135	8.0
136	7.0
137	9.0
138	1.0
139	3.0
140	1.0
141	3.0
142	7.0
143	6.0
144	7.0
145	4.0
146	2.0
147	4.0
148	8.0
149	0.0
150	1437.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Deduplicated Percentage	50.3
#Duplication Level	Percentage of deduplicated	Percentage of total
1	67.04771371769384	33.725
2	19.980119284294233	20.1
3	6.113320079522863	9.225
4	2.286282306163022	4.6
5	0.7455268389662028	1.875
6	0.44731610337972166	1.35
7	0.5964214711729622	2.1
8	0.19880715705765406	0.8
9	0.2982107355864811	1.35
>10	2.0874751491053676	17.625
>50	0.19880715705765406	7.249999999999999
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
GCCTCTTCTTCGCAGCTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTG	96	2.4	No Hit
GTCGTAGATGGCCTCGTTATCTAGGAGAACAGCAACATCGGTGTGCTCAA	67	1.675	No Hit
GCCTGTTCAAGTTGGTGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCGG	66	1.6500000000000001	No Hit
CCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAGGC	61	1.525	No Hit
GTCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAG	45	1.125	No Hit
GTTCAAGTTGGTGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCGGCATA	45	1.125	No Hit
CCTGTACATAGCTGTCCAGGTAAGCTTTGCAGGCTTCAGGCGGTTGTGGA	30	0.75	No Hit
CATATACTCGCTGTCTGGGAGCTTATTCAGCAGCAGTACGTAGCACAACA	26	0.65	No Hit
GTGGTGCGACGCCTCTTCTTCGCAGCTTCAGCGTGGATATCCTTCTTGTG	23	0.575	No Hit
GCCATCTTATTTTATCATCAAACATGCATCCCATTCCCAGGTAGCAAAAT	21	0.525	No Hit
CTCTTCTTCGCAGCTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTGTA	20	0.5	No Hit
GCTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCA	20	0.5	No Hit
CCTCTTCTTCGCAGCTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTGT	20	0.5	No Hit
GCCTCAGCATGGATGTCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCA	19	0.475	No Hit
GTGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCGGCATATGTCGTAGAT	19	0.475	No Hit
GCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAGGCTTCAGGCGG	19	0.475	No Hit
GGCTTCTTGGTGGTGCGACGCCTCTTCTTCGCAGCTTCAGCGTGGATATC	18	0.44999999999999996	No Hit
CTCAGCATGGATGTCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGG	18	0.44999999999999996	No Hit
GCAGCTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGT	17	0.42500000000000004	No Hit
GGTGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCGGCATATGTCGTAGA	16	0.4	No Hit
CGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGC	16	0.4	No Hit
CTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAGGCT	15	0.375	No Hit
CTTCGCAGCTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAG	15	0.375	No Hit
GTTGGTGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCGGCATATGTCGT	15	0.375	No Hit
CCGGGAGTATGGCTTCTTGGTGGTGCGACGCCTCTTCTTCGCAGCTTCAG	15	0.375	No Hit
CGCAGCTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTG	15	0.375	No Hit
GCGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAG	15	0.375	No Hit
CTTTATTATTAATCTGACAATGAAATGAACAACACAAGCATATTATTCAC	14	0.35000000000000003	No Hit
GCTTCTTGGTGGTGCGACGCCTCTTCTTCGCAGCTTCAGCGTGGATATCC	13	0.325	No Hit
ATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAG	13	0.325	No Hit
ATATTATTCACCAAAGCAACAGACGATTGGCCGCACAAGTTGCCATCTTA	13	0.325	No Hit
CTCTACCAGTTTTTAACTGCCCATCTGTTTGTAGAACAGCTCGACCACGA	13	0.325	No Hit
GGTGGTGCGACGCCTCTTCTTCGCAGCTTCAGCGTGGATATCCTTCTTGT	13	0.325	No Hit
GGGAGTATGGCTTCTTGGTGGTGCGACGCCTCTTCTTCGCAGCTTCAGCG	13	0.325	No Hit
CCGGCATATGTCGTAGATGGCCTCGTTATCTAGGAGAACAGCAACATCGG	13	0.325	No Hit
GGCCGCACAAGTTGCCATCTTATTTTATCATCAAACATGCATCCCATTCC	12	0.3	No Hit
CTCCGGCATATGTCGTAGATGGCCTCGTTATCTAGGAGAACAGCAACATC	11	0.27499999999999997	No Hit
GTGCGACGCCTCTTCTTCGCAGCTTCAGCGTGGATATCCTTCTTGTGCTG	11	0.27499999999999997	No Hit
GTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAGGCTTCAGGC	11	0.27499999999999997	No Hit
CATGGATGTCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGC	11	0.27499999999999997	No Hit
GGCATATGTCGTAGATGGCCTCGTTATCTAGGAGAACAGCAACATCGGTG	11	0.27499999999999997	No Hit
ATATACTCGCTGTCTGGGAGCTTATTCAGCAGCAGTACGTAGCACAACAC	11	0.27499999999999997	No Hit
AGCCTGTTCAAGTTGGTGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCG	10	0.25	No Hit
GGCTGCACAAGTTGCCATCTTATTTTATCATCAAACATGCATCCCATTCC	10	0.25	No Hit
CACACGACAGGTAGCATCACGGACAAACACCTAATGGTAACCCTTAAACA	10	0.25	No Hit
AGCGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAA	10	0.25	No Hit
GCGACGCCTCTTCTTCGCAGCTTCAGCGTGGATATCCTTCTTGTGCTGCT	9	0.22499999999999998	No Hit
CCTGTTCAAGTTGGTGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCGGC	9	0.22499999999999998	No Hit
CCTCAGCATGGATGTCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAG	9	0.22499999999999998	No Hit
CTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAG	9	0.22499999999999998	No Hit
GTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCT	9	0.22499999999999998	No Hit
CACCAAAGCAACAGACGATTGGCCGCACAAGTTGCCATCTTATTTTATCA	9	0.22499999999999998	No Hit
TTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAGGCTT	8	0.2	No Hit
CCATCTTATTTTATCATCAAACATGCATCCCATTCCCAGGTAGCAAAATA	8	0.2	No Hit
AGCAAATTCACACACAGTGACAGTGATTAAAGGAACCACACAAGCTCAAG	8	0.2	No Hit
GGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTT	8	0.2	No Hit
ACGAGATCGACTGAAAGTCTTATTCTTGTCTTATGATAACTGACTGAAAC	7	0.17500000000000002	No Hit
TGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCGGCATATGTCGTAGATG	7	0.17500000000000002	No Hit
ACCCAGGGTGCGTTCTGAGCAGCAGTCCTAGGATAGCTTCCATTATTGGC	7	0.17500000000000002	No Hit
CCCATTTGCGACTAAAGTTTGATGTGTCTCAGCCAAACCAAGTTCCCATG	7	0.17500000000000002	No Hit
GCCGCACAAGTTGCCATCTTATTTTATCATCAAACATGCATCCCATTCCC	7	0.17500000000000002	No Hit
GCAGTTCATAACCTTTATTATTAATCTGACAATGAAATGAACAACACAAG	7	0.17500000000000002	No Hit
CTTCTTCGCAGCTTCAGCGTGGATATCCTTCTTGTGCTGCTTCCTGTACA	7	0.17500000000000002	No Hit
CCAGTTTTTAACTGCCCATCTGTTTGTAGAACAGCTCGACCACGAAGCCC	7	0.17500000000000002	No Hit
ACCGGGAGTATGGCTTCTTGGTGGTGCGACGCCTCTTCTTCGCAGCTTCA	7	0.17500000000000002	No Hit
GTACATAGCTGTCCAGGTAAGCTTTGCAGGCTTCAGGCGGTTGTGGAAGT	7	0.17500000000000002	No Hit
CGGGAGTATGGCTTCTTGGTGGTGCGACGCCTCTTCTTCGCAGCTTCAGC	7	0.17500000000000002	No Hit
GTTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAGGCTTCAGG	7	0.17500000000000002	No Hit
CCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAGG	6	0.15	No Hit
GTAGGTTGGCCTCTCGATGTCAAGAGACCTCCGGCATATGTCGTAGATGG	6	0.15	No Hit
GTGGCTTCTTGGTGGTGCGACGCCTCTTCTTCGCAGCTTCAGCGTGGATA	6	0.15	No Hit
CACACATTGTTGGCCGAATTTGTACCCTCCTGCGGATGCTTCAAAGGCCG	6	0.15	No Hit
AGCGGGTACACCTCGGGCCGGACCCATTTGCTGGCGGCCATCGGAGTCGC	6	0.15	No Hit
AGCATGGATGTCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAA	6	0.15	No Hit
CTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTAAGCTTTGCAGGCTTCA	6	0.15	No Hit
AGCACAGTTCACTGTGGCTGCCACTGGTAGACCCAGTGACATGCGGAACT	6	0.15	No Hit
CCCATCTGTTTGTAGAACAGCTCGACCACGAAGCCCATTTGCGACTAAAG	6	0.15	No Hit
CGGCATATGTCGTAGATGGCCTCGTTATCTAGGAGAACAGCAACATCGGT	5	0.125	No Hit
CAGCGTGGATATCCTTCTTGTGCTGCTTCCTGTACATAGCTGTCCAGGTA	5	0.125	No Hit
ATTCACCAAAGCAACAGACGATTGGCCGCACAAGTTGCCATCTTATTTTA	5	0.125	No Hit
ACCTGAGTAACCAATATCGTATGAAATCCTTCCATCCGCATTGAACAGCC	5	0.125	No Hit
ATACCGTTCCCCGCCGCGCCGCCATGGCCGCCGCCGCCGCCGTCACCGGC	5	0.125	No Hit
ATACGGGTGAAGGAAGTGTTCAAATAGCCAAGCACGGAGAATTGATACTG	5	0.125	No Hit
ACCTGGGGTTCCCCCTTGAGCTTCCAGAGCCGGGTGCCGCAGTCGTAGAC	5	0.125	No Hit
CACAGATCTCGAACAGAGACGACGAAATTTCCTCTCCCTCAGAACGGGTT	5	0.125	No Hit
CAACAATGGTAGAATGTCGGAGCAACACCCTACAGGACATGAAACACAGA	5	0.125	No Hit
CCCAGGGTGCGTTCTGAGCAGCAGTCCTAGGATAGCTTCCATTATTGGCT	5	0.125	No Hit
GGTTGGCCTCTCGATGTCAAGAGACCTCCGGCATATGTCGTAGATGGCCT	5	0.125	No Hit
GGCCTGTTCAAGTTGGTGTAGGTTGGCCTCTCGATGTCAAGAGACCTCCG	5	0.125	No Hit
CACACACTGACTTGGAGCAGAGCGGGCATGAAAACTGGCAATGTTCCTCC	5	0.125	No Hit
ACCGGATATGGCCCTTCAGCTTGTACTCCTCTATGAGACTGTACATCCTC	5	0.125	No Hit
ACGAAATATTACATGTATCTAGACGCTTTTTGGATATAGATACATCAAAA	5	0.125	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10-11	0.0	0.0	0.0	0.0	0.0
12-13	0.0	0.0	0.0	0.0	0.0
14-15	0.0	0.0	0.0	0.0	0.0
16-17	0.0	0.0	0.0	0.0	0.0
18-19	0.0	0.0	0.0	0.0	0.0
20-21	0.0	0.0	0.0	0.0	0.0
22-23	0.0	0.0	0.0	0.0	0.0
24-25	0.0	0.0	0.0	0.0	0.0
26-27	0.0	0.0	0.0	0.0	0.0
28-29	0.0	0.0	0.0	0.0	0.0
30-31	0.0	0.0	0.0	0.0	0.0
32-33	0.0	0.0	0.0	0.0	0.0
34-35	0.0	0.0	0.0	0.0	0.0
36-37	0.0	0.0	0.0	0.0	0.0
38-39	0.0	0.0	0.0	0.0	0.0
40-41	0.0	0.0	0.0	0.0	0.0
42-43	0.0	0.0	0.0	0.0	0.0
44-45	0.0	0.0	0.0	0.0	0.0
46-47	0.0	0.0	0.0	0.0	0.0
48-49	0.0	0.0	0.0	0.0	0.0
50-51	0.0	0.0	0.0	0.0	0.0
52-53	0.0	0.0	0.0	0.0	0.0
54-55	0.0	0.0	0.0	0.0	0.0
56-57	0.0	0.0	0.0	0.0	0.0
58-59	0.0	0.0	0.0	0.0	0.0
60-61	0.0	0.0	0.0	0.0	0.0
62-63	0.0	0.0	0.0	0.0	0.0
64-65	0.0	0.0	0.0	0.0	0.0
66-67	0.0	0.0	0.0	0.0	0.0
68-69	0.0	0.0	0.0	0.0	0.0
70-71	0.0	0.0	0.0	0.0	0.0
72-73	0.0	0.0	0.0	0.0	0.0
74-75	0.0	0.0	0.0	0.0	0.0
76-77	0.0	0.0	0.0	0.0	0.0
78-79	0.0	0.0	0.0	0.0	0.0
80-81	0.0	0.0	0.0	0.0	0.0
82-83	0.0	0.0	0.0	0.0	0.0
84-85	0.0	0.0	0.0	0.0	0.0
86-87	0.0	0.0	0.0	0.0	0.0
88-89	0.0	0.0	0.0	0.0	0.0
90-91	0.0	0.0	0.0	0.0	0.0
92-93	0.0	0.0	0.0	0.0	0.0
94-95	0.0	0.0	0.0	0.0	0.0
96-97	0.0	0.0	0.0	0.0	0.0
98-99	0.0	0.0	0.0	0.0	0.0
100-101	0.0	0.0	0.0	0.0	0.0
102-103	0.0	0.0	0.0	0.0	0.0
104-105	0.0	0.0	0.0	0.0	0.0
106-107	0.0	0.0	0.0	0.0	0.0
108-109	0.0	0.0	0.0	0.0	0.0
110-111	0.0	0.0	0.0	0.0	0.0
112-113	0.0	0.0	0.0	0.0	0.0
114-115	0.0	0.0	0.0	0.0	0.0
116-117	0.0	0.0	0.0	0.0	0.0
118-119	0.0	0.0	0.0	0.0	0.0
120-121	0.0	0.0	0.0	0.0	0.0
122-123	0.0	0.0	0.0	0.0	0.0
124-125	0.0	0.0	0.0	0.0	0.0
126-127	0.0	0.0	0.0	0.0	0.0
128-129	0.0	0.0	0.0	0.0	0.0
130-131	0.0	0.0	0.0	0.0	0.0
132-133	0.0	0.0	0.0	0.0	0.0
134-135	0.0	0.0	0.0	0.0	0.0
136-137	0.0	0.0	0.0	0.0	0.0
138	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
>>Kmer Content	pass
>>END_MODULE
ERR5262810 read2 length is 90-150 nt
##FastQC	0.11.5
>>Basic Statistics	pass
#Measure	Value
Filename	ERR5262810_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4000
Sequences flagged as poor quality	0
Sequence length	90-150
%GC	48
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	36.43	37.0	37.0	37.0	37.0	37.0
2	36.192	37.0	37.0	37.0	37.0	37.0
3	36.244	37.0	37.0	37.0	37.0	37.0
4	36.357	37.0	37.0	37.0	37.0	37.0
5	36.414	37.0	37.0	37.0	37.0	37.0
6	36.3545	37.0	37.0	37.0	37.0	37.0
7	36.3125	37.0	37.0	37.0	37.0	37.0
8	36.513	37.0	37.0	37.0	37.0	37.0
9	36.4225	37.0	37.0	37.0	37.0	37.0
10-14	36.439099999999996	37.0	37.0	37.0	37.0	37.0
15-19	36.454600000000006	37.0	37.0	37.0	37.0	37.0
20-24	36.4216	37.0	37.0	37.0	37.0	37.0
25-29	36.4109	37.0	37.0	37.0	37.0	37.0
30-34	36.302200000000006	37.0	37.0	37.0	37.0	37.0
35-39	36.3703	37.0	37.0	37.0	37.0	37.0
40-44	36.3959	37.0	37.0	37.0	37.0	37.0
45-49	36.2939	37.0	37.0	37.0	37.0	37.0
50-54	36.315200000000004	37.0	37.0	37.0	37.0	37.0
55-59	36.2611	37.0	37.0	37.0	37.0	37.0
60-64	36.263600000000004	37.0	37.0	37.0	37.0	37.0
65-69	36.2899	37.0	37.0	37.0	37.0	37.0
70-74	36.2184	37.0	37.0	37.0	37.0	37.0
75-79	36.207100000000004	37.0	37.0	37.0	37.0	37.0
80-84	36.173	37.0	37.0	37.0	37.0	37.0
85-89	36.2232	37.0	37.0	37.0	37.0	37.0
90-94	36.194638359589895	37.0	37.0	37.0	37.0	37.0
95-99	36.15254595023306	37.0	37.0	37.0	37.0	37.0
100-104	36.0378326287258	37.0	37.0	37.0	37.0	37.0
105-109	35.99800459476715	37.0	37.0	37.0	37.0	37.0
110-114	35.88873104200083	37.0	37.0	37.0	37.0	37.0
115-119	35.839650207271994	37.0	37.0	37.0	37.0	37.0
120-124	35.885444920530226	37.0	37.0	37.0	37.0	37.0
125-129	35.88244441923506	37.0	37.0	37.0	37.0	37.0
130-134	35.86933138003531	37.0	37.0	37.0	37.0	37.0
135-139	35.94933124995205	37.0	37.0	37.0	37.0	37.0
140-144	35.798000674077	37.0	37.0	37.0	37.0	37.0
145-149	35.7583937348611	37.0	37.0	37.0	37.0	37.0
150	35.92672714584787	37.0	37.0	37.0	37.0	37.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
11	4.0
12	1.0
13	1.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	1.0
21	4.0
22	3.0
23	7.0
24	7.0
25	7.0
26	3.0
27	2.0
28	12.0
29	9.0
30	12.0
31	20.0
32	33.0
33	55.0
34	117.0
35	337.0
36	2661.0
37	704.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	47.325	21.25	6.35	25.074999999999996
2	28.225	21.5	26.950000000000003	23.325000000000003
3	20.625	23.075000000000003	33.15	23.150000000000002
4	25.95	27.975	23.575	22.5
5	26.775	29.799999999999997	19.45	23.974999999999998
6	22.05	30.525000000000002	22.95	24.474999999999998
7	22.525000000000002	18.775	35.9	22.8
8	22.1	20.175	26.775	30.95
9	23.375	20.875	29.025000000000002	26.724999999999998
10-14	25.5	23.16	25.46	25.88
15-19	24.205	22.67	27.445000000000004	25.679999999999996
20-24	25.865	24.125	27.365000000000002	22.645
25-29	26.365	24.02	27.07	22.545
30-34	25.19	24.88	28.189999999999998	21.740000000000002
35-39	26.450000000000003	23.625	27.52	22.405
40-44	25.259999999999998	24.18	27.994999999999997	22.564999999999998
45-49	25.585	24.23	27.875	22.31
50-54	26.35	24.68	25.71	23.26
55-59	26.355	25.335	26.179999999999996	22.13
60-64	25.255	24.654999999999998	28.21	21.88
65-69	25.39	24.255	27.175	23.18
70-74	26.174999999999997	24.42	27.375	22.03
75-79	25.085	23.880000000000003	27.785	23.25
80-84	25.790000000000003	23.455000000000002	27.63	23.125
85-89	25.655	23.955000000000002	27.215	23.175
90-94	25.08001600320064	23.779755951190236	27.465493098619724	23.6747349469894
95-99	25.17636463701406	24.94121178766198	26.56226547255716	23.3201581027668
100-104	24.351916725052547	22.780502452206985	32.38915023521169	20.478430587528777
105-109	24.10420904396808	20.6618682522297	34.16523235800344	21.068690345798778
110-114	25.425652667423382	28.490351872871738	23.55908689620381	22.52490856350107
115-119	25.383931971062317	27.211575072978807	25.726615052671658	21.677877903287218
120-124	23.686907507045863	25.07045862157315	27.965667435306173	23.276966436074815
125-129	22.20931733126855	27.30674925796877	26.05497483546264	24.42895857530004
130-134	23.14222280266423	24.121718688781506	28.470680423142227	24.26537808541204
135-139	23.12952534191472	24.255832662912308	25.89165996245642	26.722982032716548
140-144	22.250917493543565	25.146119342123146	28.625798559195324	23.97716460513796
145-149	20.41551246537396	25.526315789473685	26.82825484764543	27.22991689750692
150	19.469644103279833	28.401953942777393	28.401953942777393	23.726448011165388
>>END_MODULE
>>Per sequence GC content	warn
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	1.0
20	1.5
21	0.5
22	0.5
23	0.5
24	1.0
25	1.5
26	1.0
27	1.0
28	1.0
29	2.0
30	5.5
31	11.0
32	14.0
33	11.0
34	23.0
35	32.5
36	37.5
37	53.0
38	69.5
39	79.5
40	96.5
41	127.5
42	149.0
43	140.5
44	154.5
45	204.0
46	246.0
47	271.5
48	268.0
49	286.0
50	281.5
51	213.0
52	151.5
53	119.0
54	124.5
55	102.5
56	73.0
57	87.0
58	77.5
59	52.5
60	41.0
61	41.5
62	42.5
63	36.0
64	27.0
65	24.5
66	31.5
67	35.0
68	29.5
69	25.5
70	24.5
71	19.0
72	13.5
73	15.0
74	10.5
75	4.0
76	2.5
77	1.5
78	0.5
79	0.5
80	0.0
81	0.5
82	0.5
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.0
25-29	0.0
30-34	0.0
35-39	0.0
40-44	0.0
45-49	0.0
50-54	0.0
55-59	0.0
60-64	0.0
65-69	0.0
70-74	0.0
75-79	0.0
80-84	0.0
85-89	0.0
90-94	0.0
95-99	0.0
100-104	0.0
105-109	0.0
110-114	0.0
115-119	0.0
120-124	0.0
125-129	0.0
130-134	0.0
135-139	0.0
140-144	0.0
145-149	0.0
150	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
90-91	1.0
92-93	0.0
94-95	1.0
96-97	1.0
98-99	0.0
100-101	1.0
102-103	0.0
104-105	0.0
106-107	2398.0
108-109	6.0
110-111	8.0
112-113	2.0
114-115	3.0
116-117	6.0
118-119	9.0
120-121	2.0
122-123	6.0
124-125	4.0
126-127	3.0
128-129	10.0
130-131	8.0
132-133	10.0
134-135	23.0
136-137	16.0
138-139	4.0
140-141	4.0
142-143	13.0
144-145	14.0
146-147	6.0
148-149	8.0
150-151	1433.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Deduplicated Percentage	57.49999999999999
#Duplication Level	Percentage of deduplicated	Percentage of total
1	66.73913043478261	38.375
2	19.608695652173914	22.55
3	6.739130434782608	11.625
4	2.4347826086956523	5.6000000000000005
5	1.0434782608695654	3.0
6	1.2173913043478262	4.2
7	0.47826086956521735	1.925
8	0.5217391304347827	2.4
9	0.17391304347826086	0.8999999999999999
>10	1.0434782608695654	9.425
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	warn
#Sequence	Count	Percentage	Possible Source
CGCCGCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTG	35	0.8750000000000001	No Hit
GCCGCCGCGCCGCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCT	35	0.8750000000000001	No Hit
GCCGCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTGC	28	0.7000000000000001	No Hit
CCGCGCCGCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGG	21	0.525	No Hit
GTTTTCTAAGGCTGCCAAGATGGTTCTGAAGACTGAGCTTTGCCGTTTCA	21	0.525	No Hit
GCCGCGCCGCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAG	20	0.5	No Hit
GGTTCATTCGTGCTGATTCACAGGTTTTCCTTTTTGCCAACTCAAAATGC	18	0.44999999999999996	No Hit
CCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTGCCAAGATGGTTCT	16	0.4	No Hit
AGATGGTTCTGAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATAC	15	0.375	No Hit
CTGAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATACCCAGGAAA	15	0.375	No Hit
GATGGTTCTGAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATACC	14	0.35000000000000003	No Hit
GGTTTTCTAAGGCTGCCAAGATGGTTCTGAAGACTGAGCTTTGCCGTTTC	13	0.325	No Hit
GTTTCAGCGGCCAGAAGATATACCCAGGAAAGGGTATAAGGTTCATTCGT	12	0.3	No Hit
GTTCATTCGTGCTGATTCACAGGTTTTCCTTTTTGCCAACTCAAAATGCA	11	0.27499999999999997	No Hit
TCTAAGGCTGCCAAGATGGTTCTGAAGACTGAGCTTTGCCGTTTCAGCGG	11	0.27499999999999997	No Hit
GGAACTTGTGAAGGTTTTCTAAGGCTGCCAAGATGGTTCTGAAGACTGAG	11	0.27499999999999997	No Hit
GGAACTTCTGAAGGTGTTCTAAGGCTGCCAAGATGGTTCTGAAGACTGAG	11	0.27499999999999997	No Hit
GTTCTGAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATACCCAGG	10	0.25	No Hit
GCGGCCAGAAGATATACCCAGGAAAGGGTATAAGGTTCATTCGTGCTGAT	10	0.25	No Hit
ACTCAAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTT	10	0.25	No Hit
ATTACACTGTTGGAAAGGAGATTGTAGATCTATGCCTGGACCGTGTGCGC	10	0.25	No Hit
GTGATGTTATCGCTCCCGAGTATCCTAGATCTCGCTCCATCGCGTAGGGT	10	0.25	No Hit
GCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTGCCAA	10	0.25	No Hit
AGAAGATATACCCAGGAAAGGGTATAAGGTTCATTCGTGCTGATTCACAG	10	0.25	No Hit
CCTTGCTCAAGGAACTTCTGAAGGTGTTCTAAGGCTGCCAAGATGGTTCT	9	0.22499999999999998	No Hit
GCTCGAATCAGTGTCAAGTTAGTATCTGAGGCTGGTGTAGGAGTTGTTGC	9	0.22499999999999998	No Hit
TGAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATACCCAGGAAAG	9	0.22499999999999998	No Hit
GGCAAGAAGTCTAAGCTTGGTTTCACCATTTATCCTTCTCCACAGGTCTC	9	0.22499999999999998	No Hit
GTAGATCTATGCCTGGACCGTGTGCGCAAGTTGGCAGACAATTGCACTGG	8	0.2	No Hit
GTGATATACACGATCTTACCGCACATACAGATCTGAGCTATTTTCATTTG	8	0.2	No Hit
GCCGCCGCCCCTCCTCCTTGCTCAAGGAACTTCTGAAGGTGTTCTAAGGC	8	0.2	No Hit
GCCACTGATCAAGGCTTTGCAACAGGTCCTCGCTAATAGCTTGCGCTATT	8	0.2	No Hit
GCTCATCTCAGGGAAGGAGGATGCCGCTAACAACTTTGCCCGTGGACATT	8	0.2	No Hit
CCGCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTGCC	8	0.2	No Hit
GCGCCGCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCT	8	0.2	No Hit
AGAAGATTTACCCAGGGAAGGGTATCAGGTTCATTCGTGCGGATTCGCAG	8	0.2	No Hit
CCTCCTTGCTCAAGGAACTTCTGAAGGTGTTCTAAGGCTGCCAAGATGGT	8	0.2	No Hit
GGTGTTCAATGCTGTCGGTGGTGGAACTGGATCAGGACTTGGTTCTCTGT	8	0.2	No Hit
GTGTGCGCAAGTTGGCAGACAATTGCACTGGGCTGCAGGGATTCTTGGTG	8	0.2	No Hit
ACTACAGTGGCTATGCTATCACCCTGGCTTGATGGTAGATCATCGATCAG	8	0.2	No Hit
CATGCATGCAGATCAGGTCACATGGATGCAAGACTAGTAGTACCAACTAG	7	0.17500000000000002	No Hit
ATAAGGTTCATTCGTGCTGATTCACAGGTTTTCCTTTTTGCCAACTCAAA	7	0.17500000000000002	No Hit
GCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTGCCAAGATGGTTCTGAAG	7	0.17500000000000002	No Hit
GTGGAACTGGATCAGGACTTGGTTCTCTGTTGTTGGAGCGTCTCTCAGTG	7	0.17500000000000002	No Hit
AAGATGGTTCTGAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATA	7	0.17500000000000002	No Hit
CAGGTTTTCCTTTTTGCCAACTCAAAATGCAAGCGCTACTTCCACAACCG	7	0.17500000000000002	No Hit
CCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTGCCAAGAT	7	0.17500000000000002	No Hit
ATCACCTCCTGGTTCCAAGATGTCGAAACGAGGGCGCGGAGGTTCCGCTG	7	0.17500000000000002	No Hit
CTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTGCCAAGATGGTT	7	0.17500000000000002	No Hit
CGACAACAGAGGATGCCAGTTTCTAGATGGATGGTTACAAATCGCACGTC	7	0.17500000000000002	No Hit
GAAGTCTAAGCTTGGTTTCACCATTTATCCTTCTCCACAGGTCTCAACAG	7	0.17500000000000002	No Hit
GTGAAGGTTTTCTAAGGCTGCCAAGATGGTTCTGAAGACTGAGCTTTGCC	6	0.15	No Hit
GCCGCCCCTCCTCCTTGCTCAAGGAACTTCTGAAGGTGTTCTAAGGCTGC	6	0.15	No Hit
CTTTGCAACAGGTCCTCGCTAATAGCTTGCGCTATTTCTTGAGGAGGCCG	6	0.15	No Hit
AGGAGATTGTAGATCTATGCCTGGACCGTGTGCGCAAGTTGGCAGACAAT	6	0.15	No Hit
GTTGGCAGACAATTGCACTGGGCTGCAGGGATTCTTGGTGTTCAATGCTG	6	0.15	No Hit
GTCTAAGCTTGGTTTCACCATTTATCCTTCTCCACAGGTCTCAACAGCTG	6	0.15	No Hit
CTTGGTTCTCTGTTGTTGGAGCGTCTCTCAGTGGATTATGGCAAGAAGTC	6	0.15	No Hit
GTCAGCTCTACAGTAACAGAATTTCAGGTTCATCAATCTCAGCAAAATCA	6	0.15	No Hit
AAAGGGTATAAGGTTCATTCGTGCTGATTCACAGGTTTTCCTTTTTGCCA	6	0.15	No Hit
CTCAGTGGATTATGGCAAGAAGTCTAAGCTTGGTTTCACCATTTATCCTT	6	0.15	No Hit
GCTTGGTTTCACCATTTATCCTTCTCCACAGGTCTCAACAGCTGTCGTAG	6	0.15	No Hit
CGCGCCGCCGCCCCTCCTCCTTGCTCAAGGAACTTCTGAAGGTGTTCTAA	6	0.15	No Hit
GGGATTCTTGGTGTTCAATGCTGTCGGTGGTGGAACTGGATCAGGACTTG	6	0.15	No Hit
GTTTTCCTTTTTGCCAACTCAAAATGCAAGCGCTACTTCCACAACCGCCT	6	0.15	No Hit
GGGTATAAGGTTCATTCGTGCTGATTCACAGGTTTTCCTTTTTGCCAACT	6	0.15	No Hit
AGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATACCCAGGAAAGGGT	6	0.15	No Hit
CTTTTTGCCAACTCAAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCC	6	0.15	No Hit
GCGCAAGTTGGCAGACAATTGCACTGGGCTGCAGGGATTCTTGGTGTTCA	6	0.15	No Hit
GGGCAAGCCACTGATCAAGGCTTTGCAACAGGTCCTCGCTAATAGCTTGC	6	0.15	No Hit
GTAAAAGGACATGCGGACCATGTACTTATTTCTGGCCATGATGGCGGCAC	6	0.15	No Hit
CTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGCTGCCAAG	6	0.15	No Hit
GCCAAGATGGTTCTGAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGAT	6	0.15	No Hit
CCTCTCAGCTCTCCTCTCTCTCTTTCTCCGCCGCCGCAGTCTCCGAGGAA	6	0.15	No Hit
CAAGATGGTTCTGAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATAT	6	0.15	No Hit
CTTGAAATATGCATAATTCCCAAAAGGTGATATACACGATCTTACCGCAC	6	0.15	No Hit
GAACTTGTGAAGGTTTTCTAAGGCTGCCAAGATGGTTCTGAAGACTGAGC	6	0.15	No Hit
GTATAAGGTTCATTCGTGCTGATTCACAGGTTTTCCTTTTTGCCAACTCA	6	0.15	No Hit
GAAGATATACCCAGGAAAGGGTATAAGGTTCATTCGTGCTGATTCACAGG	6	0.15	No Hit
GTATGTATCCCTTGTACTCCTTCCGTCCCATATTAAGTTACTCAAATTTG	5	0.125	No Hit
CACAGGTTTTCCTTTTTGCCAACTCAAAATGCAAGCGCTACTTCCACAAC	5	0.125	No Hit
CTCGACCCAATCCTCTCGCCGCCGCCGTAGCAACCTTTGAGAGAACGAGA	5	0.125	No Hit
ATCCGCGCCGCCGCCCCTCCTCCTTGCTCAAGGAACTTCTGAAGGTGTTC	5	0.125	No Hit
TATGCCTGGACCGTGTGCGCAAGTTGGCAGACAATTGCACTGGGCTGCAG	5	0.125	No Hit
TGGAACTGGATCAGGACTTGGTTCTCTGTTGTTGGAGCGTCTCTCAGTGG	5	0.125	No Hit
GTATGGTATGTTACAGCAAAATGCTTGGAGGCCACAGAGGGGGCTTCCTG	5	0.125	No Hit
CAGCATTCCTATCCCCAGAGTGTGGAGGTTGCGATTGTCTGACCATGCCC	5	0.125	No Hit
AGACAATTGCACTGGGCTGCAGGGATTCTTGGTGTTCAATGCTGTCGGTG	5	0.125	No Hit
GTTGTTGGAGCGTCTCTCAGTGGATTATGGCAAGAAGTCTAAGCTTGGTT	5	0.125	No Hit
GAAGACTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATACCCAGGAAAGG	5	0.125	No Hit
CTTTGCGTTATTTAATGAGAACTCGAAGCCTGGACCAAGTTCTGAGAAGC	5	0.125	No Hit
CTGAGCTTTGCCGTTTCAGCGGCCAGAAGATATACCCAGGAAAGGGTATA	5	0.125	No Hit
CACGCACCACACCAAGAAGCATCCCCTCCCCAAGAAAGAAAAATCTCCCC	5	0.125	No Hit
CGCGCCGCTCCTCCTCCTTGCTTAAGGAACTTGTGAAGGTTTTCTAAGGC	5	0.125	No Hit
GATGTATCTGTCTTGCCGTGCGGTCACACGATTCATGAAAACTGCTTGAA	5	0.125	No Hit
AGGTTTTCTAAGGCTGCCAAGATGGTTCTGAAGACTGAGCTTTGCCGTTT	5	0.125	No Hit
GGCTTTGCAACAGGTCCTCGCTAATAGCTTGCGCTATTTCTTGAGGAGGC	5	0.125	No Hit
GCGAAGGTGGTGAGCTTCCAGGTCACAAGGTTATTGGTGATATTGCAGTT	5	0.125	No Hit
CCGACCCTTACGCGCGCGCGCAGGCCAGGTTCTGGGCCGACTACGTCGAC	5	0.125	No Hit
GATATACCCAGGAAAGGGTATAAGGTTCATTCGTGCTGATTCACAGGTTT	5	0.125	No Hit
CACCTCTTCGGCTAAGCGACGTCGCTAGACCCGCCGATCGATACGCCACG	5	0.125	No Hit
GTTGCTGGTGACCATGGCAAGGAGTCCAAGGATAGGGAGGAGCAGGCTGA	5	0.125	No Hit
GGCAGACAATTGCACTGGGCTGCAGGGATTCTTGGTGTTCAATGCTGTCG	5	0.125	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10-11	0.0	0.0	0.0	0.0	0.0
12-13	0.0	0.0	0.0	0.0	0.0
14-15	0.0	0.0	0.0	0.0	0.0
16-17	0.0	0.0	0.0	0.0	0.0
18-19	0.0	0.0	0.0	0.0	0.0
20-21	0.0	0.0	0.0	0.0	0.0
22-23	0.0	0.0	0.0	0.0	0.0
24-25	0.0	0.0	0.0	0.0	0.0
26-27	0.0	0.0	0.0	0.0	0.0
28-29	0.0	0.0	0.0	0.0	0.0
30-31	0.0	0.0	0.0	0.0	0.0
32-33	0.0	0.0	0.0	0.0	0.0
34-35	0.0	0.0	0.0	0.0	0.0
36-37	0.0	0.0	0.0	0.0	0.0
38-39	0.0	0.0	0.0	0.0	0.0
40-41	0.0	0.0	0.0	0.0	0.0
42-43	0.0	0.0	0.0	0.0	0.0
44-45	0.0	0.0	0.0	0.0	0.0
46-47	0.0	0.0	0.0	0.0	0.0
48-49	0.0	0.0	0.0	0.0	0.0
50-51	0.0	0.0	0.0	0.0	0.0
52-53	0.0	0.0	0.0	0.0	0.0
54-55	0.0	0.0	0.0	0.0	0.0
56-57	0.0	0.0	0.0	0.0	0.0
58-59	0.0	0.0	0.0	0.0	0.0
60-61	0.0	0.0	0.0	0.0	0.0
62-63	0.0	0.0	0.0	0.0	0.0
64-65	0.0	0.0	0.0	0.0	0.0
66-67	0.0	0.0	0.0	0.0	0.0
68-69	0.0	0.0	0.0	0.0	0.0
70-71	0.0	0.0	0.0	0.0	0.0
72-73	0.0	0.0	0.0	0.0	0.0
74-75	0.0	0.0	0.0	0.0	0.0
76-77	0.0	0.0	0.0	0.0	0.0
78-79	0.0	0.0	0.0	0.0	0.0
80-81	0.0	0.0	0.0	0.0	0.0
82-83	0.0	0.0	0.0	0.0	0.0
84-85	0.0	0.0	0.0	0.0	0.0
86-87	0.0	0.0	0.0	0.0	0.0
88-89	0.0	0.0	0.0	0.0	0.0
90-91	0.0	0.0	0.0	0.0	0.0
92-93	0.0	0.0	0.0	0.0	0.0
94-95	0.0	0.0	0.0	0.0	0.0
96-97	0.0	0.0	0.0	0.0	0.0
98-99	0.0	0.0	0.0	0.0	0.0
100-101	0.0	0.0	0.0	0.0	0.0
102-103	0.0	0.0	0.0	0.0	0.0
104-105	0.0	0.0	0.0	0.0	0.0
106-107	0.0	0.0	0.0	0.0	0.0
108-109	0.0	0.0	0.0	0.0	0.0
110-111	0.0	0.0	0.0	0.0	0.0
112-113	0.0	0.0	0.0	0.0	0.0
114-115	0.0	0.0	0.0	0.0	0.0
116-117	0.0	0.0	0.0	0.0	0.0
118-119	0.0	0.0	0.0	0.0	0.0
120-121	0.0	0.0	0.0	0.0	0.0
122-123	0.0	0.0	0.0	0.0	0.0
124-125	0.0	0.0	0.0	0.0	0.0
126-127	0.0	0.0	0.0	0.0	0.0
128-129	0.0	0.0	0.0	0.0	0.0
130-131	0.0	0.0	0.0	0.0	0.0
132-133	0.0	0.0	0.0	0.0	0.0
134-135	0.0	0.0	0.0	0.0	0.0
136-137	0.0	0.0	0.0	0.0	0.0
138	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGATATC	25	0.009057255	128.97931	140-144
>>END_MODULE
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593972 spots for ERR5262810.sra
Written 1593972 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
Read 1593967 spots for ERR5262810.sra
Written 1593967 spots for ERR5262810.sra
SRR ids: ['ERR5262810.sra']
extra args: ['--split-files', '--defline-qual', '+']
tempdir: /tmp/pfd_4wijfn0i
ERR5262810.sra spots: 31879345
blocks: [[1, 1593967], [1593968, 3187934], [3187935, 4781901], [4781902, 6375868], [6375869, 7969835], [7969836, 9563802], [9563803, 11157769], [11157770, 12751736], [12751737, 14345703], [14345704, 15939670], [15939671, 17533637], [17533638, 19127604], [19127605, 20721571], [20721572, 22315538], [22315539, 23909505], [23909506, 25503472], [25503473, 27097439], [27097440, 28691406], [28691407, 30285373], [30285374, 31879345]]
ERR5262810 file size 10461562
ERR5262810 completed basic pipeline successfully
skewer v0.2.2 [April 4, 2016]
COMMAND LINE:	skewer -f sanger -l 18 -q 10 -k inf -t 20 -o ERR5262810 ERR5262810_1.fastq ERR5262810_2.fastq
Input file:	ERR5262810_1.fastq
Paired file:	ERR5262810_2.fastq
trimmed:	ERR5262810-trimmed-pair1.fastq, ERR5262810-trimmed-pair2.fastq

Parameters used:
-- 3' end adapter sequence (-x):	AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC
-- paired 3' end adapter sequence (-y):	AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTA
-- maximum error ratio allowed (-r):	0.100
-- maximum indel error ratio allowed (-d):	0.030
-- end quality threshold (-q):		10
-- minimum read length allowed after trimming (-l):	18
-- file format (-f):		Sanger/Illumina 1.8+ FASTQ 
-- number of concurrent threads (-t):	20
Fri Dec  6 12:23:41 2024 >> started

Fri Dec  6 12:24:17 2024 >> done (35.462s)
31879345 read pairs processed; of these:
       1 ( 0.00%) short read pairs filtered out after trimming by size control
       0 ( 0.00%) empty read pairs filtered out after trimming by size control
31879344 (100.00%) read pairs available; of these:
    9086 ( 0.03%) trimmed read pairs available after processing
31870258 (99.97%) untrimmed read pairs available after processing

Length distribution of reads after trimming:
length	count	percentage
 20	       1	  0.00%
 21	       0	  0.00%
 22	       0	  0.00%
 23	       1	  0.00%
 24	       0	  0.00%
 25	       0	  0.00%
 26	       0	  0.00%
 27	       0	  0.00%
 28	       1	  0.00%
 29	       0	  0.00%
 30	       2	  0.00%
 31	       2	  0.00%
 32	       3	  0.00%
 33	       1	  0.00%
 34	       3	  0.00%
 35	       1	  0.00%
 36	       0	  0.00%
 37	       1	  0.00%
 38	       2	  0.00%
 39	       0	  0.00%
 40	       0	  0.00%
 41	       0	  0.00%
 42	       0	  0.00%
 43	       0	  0.00%
 44	       0	  0.00%
 45	       1	  0.00%
 46	       3	  0.00%
 47	       2	  0.00%
 48	       2	  0.00%
 49	     323	  0.00%
 50	     365	  0.00%
 51	     408	  0.00%
 52	     419	  0.00%
 53	     424	  0.00%
 54	     507	  0.00%
 55	     602	  0.00%
 56	     629	  0.00%
 57	     716	  0.00%
 58	     830	  0.00%
 59	     974	  0.00%
 60	    1140	  0.00%
 61	    1219	  0.00%
 62	    1380	  0.00%
 63	    1554	  0.00%
 64	    1715	  0.01%
 65	    1934	  0.01%
 66	    2125	  0.01%
 67	    2319	  0.01%
 68	    2619	  0.01%
 69	    3115	  0.01%
 70	    3561	  0.01%
 71	    4033	  0.01%
 72	    4717	  0.01%
 73	    5212	  0.02%
 74	    5818	  0.02%
 75	    6413	  0.02%
 76	    7034	  0.02%
 77	    7503	  0.02%
 78	    8478	  0.03%
 79	    9354	  0.03%
 80	   10575	  0.03%
 81	   11830	  0.04%
 82	   13584	  0.04%
 83	   14654	  0.05%
 84	   16114	  0.05%
 85	   17221	  0.05%
 86	   18464	  0.06%
 87	   19589	  0.06%
 88	   21095	  0.07%
 89	   22279	  0.07%
 90	   24296	  0.08%
 91	   26538	  0.08%
 92	   28343	  0.09%
 93	   30900	  0.10%
 94	   33142	  0.10%
 95	   34380	  0.11%
 96	   36216	  0.11%
 97	   37339	  0.12%
 98	   39025	  0.12%
 99	   40781	  0.13%
100	   42895	  0.13%
101	   44754	  0.14%
102	   47442	  0.15%
103	   49590	  0.16%
104	   51427	  0.16%
105	   54608	  0.17%
106	   56036	  0.18%
107	   57459	  0.18%
108	   59255	  0.19%
109	   60155	  0.19%
110	   62897	  0.20%
111	   64854	  0.20%
112	   67312	  0.21%
113	   70229	  0.22%
114	   73361	  0.23%
115	   74741	  0.23%
116	   77102	  0.24%
117	   78312	  0.25%
118	   80378	  0.25%
119	   80655	  0.25%
120	   81345	  0.26%
121	   83740	  0.26%
122	   85662	  0.27%
123	   88932	  0.28%
124	   92180	  0.29%
125	   93738	  0.29%
126	   94736	  0.30%
127	   96383	  0.30%
128	   97075	  0.30%
129	   99761	  0.31%
130	   99349	  0.31%
131	  100851	  0.32%
132	  103226	  0.32%
133	  104747	  0.33%
134	  107386	  0.34%
135	  109140	  0.34%
136	  110786	  0.35%
137	  111599	  0.35%
138	  113140	  0.35%
139	  116876	  0.37%
140	  117731	  0.37%
141	  123237	  0.39%
142	  127289	  0.40%
143	  127960	  0.40%
144	  131183	  0.41%
145	  128989	  0.40%
146	  132972	  0.42%
147	  258263	  0.81%
148	  120463	  0.38%
149	  119488	  0.37%
150	26663824	 83.64%
31879344 reads passed initial QC


criterion=sequence-density
sequence-density=2.29
sequence-density-rank=1
fanout-score=2.60
fanout-score-rank=27
prefix-density=2.59
prefix-fanout=2.3
sequence=GAACCGGAACCG


criterion=fanout-score
sequence-density=0.01
sequence-density-rank=34
fanout-score=806.26
fanout-score-rank=1
prefix-density=5.20
prefix-fanout=1.0
sequence=GGCGTCGCGGCACCGCCCGCGTTCAGCTTGTTGAAGGCCATGCCGGAGCCCTGGCCGGCGAAGACGAAGATGAGCGTGGAGATGAACTCGGCGACGGCCGCCTTGAGGGCGCCGGCCTGGTACACCTCATGGTGGCTCCCCACGGCAACCCTGCTGATCGGCATTCTGACCACCAAAAGCTAGAGATCGAGACCGGCCGGAGCTGGGAGAGATGATGAGAGAGTGTT


criterion=sequence-density
sequence-density=8.32
sequence-density-rank=1
fanout-score=2.00
fanout-score-rank=30
prefix-density=8.29
prefix-fanout=2.0
sequence=CGGTTCCGGTTC


criterion=fanout-score
sequence-density=0.26
sequence-density-rank=14
fanout-score=32.16
fanout-score-rank=1
prefix-density=1.05
prefix-fanout=7.8
sequence=CGGCGGCGGCGGAGCTGACGGGCAGCCACCTGGACGAGGTGAAGCGGATGGTGGCCCAGTTCCGGGAGCCCGTGGTGAAGATCGAGGGGGCCAGCCTCCGCGTGGGCCAGGTGGCCGCCGTGGCCCAGGCAAA
Potential 3prime adapter identified. Now checking if in reference sequence
/dee2/code/volunteer_pipeline.sh: line 905: -f: command not found
/dee2/code/volunteer_pipeline.sh: line 906: -f: command not found
Adapter seq not found in reference. Now shuffling file before clipping
skewer v0.2.2 [April 4, 2016]
COMMAND LINE:	skewer -f sanger -l 18 -t 20 -x GAACCGGAACCG -y CGGTTCCGGTTC -o ERR5262810 ERR5262810_1.fastq ERR5262810_2.fastq
Input file:	ERR5262810_1.fastq
Paired file:	ERR5262810_2.fastq
trimmed:	ERR5262810-trimmed-pair1.fastq, ERR5262810-trimmed-pair2.fastq

Parameters used:
-- 3' end adapter sequence (-x):	GAACCGGAACCG
-- paired 3' end adapter sequence (-y):	CGGTTCCGGTTC
-- maximum error ratio allowed (-r):	0.100
-- maximum indel error ratio allowed (-d):	0.030
-- minimum read length allowed after trimming (-l):	18
-- file format (-f):		Sanger/Illumina 1.8+ FASTQ 
-- number of concurrent threads (-t):	20
Fri Dec  6 12:27:17 2024 >> started

Fri Dec  6 12:27:40 2024 >> done (23.024s)
21252896 read pairs processed; of these:
      91 ( 0.00%) short read pairs filtered out after trimming by size control
     264 ( 0.00%) empty read pairs filtered out after trimming by size control
21252541 (100.00%) read pairs available; of these:
     137 ( 0.00%) trimmed read pairs available after processing
21252404 (100.00%) untrimmed read pairs available after processing

Length distribution of reads after trimming:
length	count	percentage
 20	       1	  0.00%
 21	       0	  0.00%
 22	       0	  0.00%
 23	       1	  0.00%
 24	       0	  0.00%
 25	       0	  0.00%
 26	       0	  0.00%
 27	       0	  0.00%
 28	       1	  0.00%
 29	       0	  0.00%
 30	       1	  0.00%
 31	       1	  0.00%
 32	       1	  0.00%
 33	       0	  0.00%
 34	       2	  0.00%
 35	       0	  0.00%
 36	       0	  0.00%
 37	       1	  0.00%
 38	       1	  0.00%
 39	       0	  0.00%
 40	       0	  0.00%
 41	       0	  0.00%
 42	       0	  0.00%
 43	       0	  0.00%
 44	       0	  0.00%
 45	       1	  0.00%
 46	       3	  0.00%
 47	       1	  0.00%
 48	       2	  0.00%
 49	     287	  0.00%
 50	     337	  0.00%
 51	     174	  0.00%
 52	     153	  0.00%
 53	      62	  0.00%
 54	      87	  0.00%
 55	      93	  0.00%
 56	     353	  0.00%
 57	     673	  0.00%
 58	     771	  0.00%
 59	     923	  0.00%
 60	    1086	  0.01%
 61	     533	  0.00%
 62	     164	  0.00%
 63	     472	  0.00%
 64	     699	  0.00%
 65	    1855	  0.01%
 66	    1690	  0.01%
 67	     684	  0.00%
 68	    2513	  0.01%
 69	    2253	  0.01%
 70	    1603	  0.01%
 71	    3274	  0.02%
 72	    3305	  0.02%
 73	    3373	  0.02%
 74	    4138	  0.02%
 75	    5553	  0.03%
 76	    4893	  0.02%
 77	    4446	  0.02%
 78	    5607	  0.03%
 79	    4716	  0.02%
 80	    7027	  0.03%
 81	    9319	  0.04%
 82	    9740	  0.05%
 83	    9529	  0.04%
 84	    9856	  0.05%
 85	   10209	  0.05%
 86	   14012	  0.07%
 87	   12643	  0.06%
 88	   13491	  0.06%
 89	   15442	  0.07%
 90	   16522	  0.08%
 91	   16426	  0.08%
 92	   19716	  0.09%
 93	   20750	  0.10%
 94	   22414	  0.11%
 95	   22743	  0.11%
 96	   24340	  0.11%
 97	   24886	  0.12%
 98	   25964	  0.12%
 99	   27262	  0.13%
100	   29542	  0.14%
101	   30121	  0.14%
102	   30217	  0.14%
103	   34874	  0.16%
104	   33273	  0.16%
105	   35785	  0.17%
106	   39439	  0.19%
107	   38181	  0.18%
108	   38889	  0.18%
109	   40008	  0.19%
110	   42680	  0.20%
111	   43036	  0.20%
112	   44196	  0.21%
113	   47599	  0.22%
114	   47689	  0.22%
115	   49896	  0.23%
116	   52200	  0.25%
117	   51454	  0.24%
118	   53313	  0.25%
119	   53337	  0.25%
120	   53672	  0.25%
121	   56354	  0.27%
122	   56680	  0.27%
123	   59458	  0.28%
124	   61199	  0.29%
125	   62644	  0.29%
126	   63188	  0.30%
127	   64480	  0.30%
128	   64722	  0.30%
129	   66103	  0.31%
130	   66631	  0.31%
131	   67179	  0.32%
132	   69186	  0.33%
133	   69788	  0.33%
134	   71485	  0.34%
135	   72893	  0.34%
136	   73860	  0.35%
137	   74291	  0.35%
138	   75830	  0.36%
139	   77678	  0.37%
140	   78942	  0.37%
141	   83166	  0.39%
142	   85205	  0.40%
143	   85110	  0.40%
144	   88214	  0.42%
145	   86646	  0.41%
146	   89106	  0.42%
147	  171801	  0.81%
148	   80565	  0.38%
149	   79616	  0.37%
150	17772042	 83.62%


criterion=sequence-density
sequence-density=0.13
sequence-density-rank=1
fanout-score=6.30
fanout-score-rank=37
prefix-density=0.21
prefix-fanout=4.0
sequence=GAACCGGAACCG


criterion=fanout-score
sequence-density=0.03
sequence-density-rank=37
fanout-score=361.20
fanout-score-rank=1
prefix-density=0.63
prefix-fanout=16.3
sequence=CCGCCGCCGCGTAGCTTCTGGTGGACGGGGCCAGCAGCTGGGCCAGCGCGCGGGCAGCAGCCGAGGAACCGGAGAGAGCGAGAGCCATCGATTGATCTGTGTGTTTTGATCGGATGGCTGGTGGCGCTCCGGCTCTCTGCTGCTGCTCCAACGTGGGTTGCTG


criterion=sequence-density
sequence-density=0.58
sequence-density-rank=1
fanout-score=2.07
fanout-score-rank=37
prefix-density=0.59
prefix-fanout=2.0
sequence=CGGTTCCGGTTC


criterion=fanout-score
sequence-density=0.11
sequence-density-rank=12
fanout-score=175.13
fanout-score-rank=1
prefix-density=0.97
prefix-fanout=19.6
sequence=GCCGCCGCCGTC
ERR5262810 testing PE reads STAR mapping to Ensembl genome
                                 Started job on |	Dec 06 12:28:40
                             Started mapping on |	Dec 06 12:28:40
                                    Finished on |	Dec 06 12:31:33
       Mapping speed, Million of reads per hour |	663.38

                          Number of input reads |	31878989
                      Average input read length |	291
                                    UNIQUE READS:
                   Uniquely mapped reads number |	30684943
                        Uniquely mapped reads % |	96.25%
                          Average mapped length |	290.71
                       Number of splices: Total |	29240197
            Number of splices: Annotated (sjdb) |	27292549
                       Number of splices: GT/AG |	28827119
                       Number of splices: GC/AG |	345932
                       Number of splices: AT/AC |	19174
               Number of splices: Non-canonical |	47972
                      Mismatch rate per base, % |	0.23%
                         Deletion rate per base |	0.01%
                        Deletion average length |	2.45
                        Insertion rate per base |	0.01%
                       Insertion average length |	2.38
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	353511
             % of reads mapped to multiple loci |	1.11%
        Number of reads mapped to too many loci |	4697
             % of reads mapped to too many loci |	0.01%
                                  UNMAPPED READS:
       % of reads unmapped: too many mismatches |	0.00%
                 % of reads unmapped: too short |	2.61%
                     % of reads unmapped: other |	0.01%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%
N_unmapped	840535	840535	840535
N_multimapping	353511	353511	353511
N_noFeature	1205143	29888655	1452516
N_ambiguous	650141	3995	101878
UnstrandedReadsAssigned:28829659 PositiveStrandReadsAssigned:792293 NegativeStrandReadsAssigned:29130549
Dataset is classified negative stranded
MeadianReadLen=150 20thPercentileLength=150 echo kmer=145
ERR5262810 Starting Kallisto paired end mapping to ensembl reference transcriptome

[quant] fragment length distribution will be estimated from the data
[index] k-mer length: 31
[index] number of targets: 52,972
[index] number of k-mers: 66,720,672
[index] number of equivalence classes: 111,837
[quant] running in paired-end mode
[quant] will process pair 1: ERR5262810-trimmed-pair1.fastq
                             ERR5262810-trimmed-pair2.fastq
[quant] finding pseudoalignments for the reads ... done
[quant] processed 31,878,989 reads, 29,576,171 reads pseudoaligned
[quant] estimated average fragment length: 263.837
[   em] quantifying the abundances ... done
[   em] the Expectation-Maximization algorithm ran for 1,253 rounds

  52973 ERR5262810.ke.tsv
  35125 ERR5262810.se.tsv
  88098 total
==> ERR5262810.ke.tsv <==
target_id	length	eff_length	est_counts	tpm
PNS24245	936	674.012	0	0
PNS24247	1044	781.163	160.552	10.1142
PNS24249	1928	1665.16	325.255	9.61224
PNS24246	1044	781.163	160.552	10.1142
PNS24248	1044	781.163	160.552	10.1142
PNS24244	1471	1208.16	168.088	6.84652
PNS24243	293	104.843	2	0.938751
KQK14069	1603	1340.16	35396.9	1299.77
KQK14071	474	241.528	189.489	38.6077

==> ERR5262810.se.tsv <==
BRADI_1g14170v3	36115
BRADI_1g53295v3	291
BRADI_1g59795v3	560
BRADI_1g07683v3	0
BRADI_1g00485v3	57
BRADI_1g20270v3	1340
BRADI_1g74790v3	1538
BRADI_1g09890v3	0
BRADI_1g77505v3	282
BRADI_1g48960v3	0
ERR5262810 completed mapping pipeline successfully
