Starting /dee2/code/volunteer_pipeline.sh SRR13695471
    current disk space = 3049943666688
    free memory = 1582705560 
SRR13695471 SRAfilesize
877d681326a6ab5597465ea6d0a7b147  SRR13695471.sra
SRR13695471.sra file validated
SRR13695471 is paired end
SRR13695471 is conventional basespace
SRR13695471 read1 length is 151 nt
##FastQC	0.11.5
>>Basic Statistics	pass
#Measure	Value
Filename	SRR13695471_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4000
Sequences flagged as poor quality	0
Sequence length	151
%GC	44
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	36.54	37.0	37.0	37.0	37.0	37.0
2	36.24	37.0	37.0	37.0	37.0	37.0
3	36.527	37.0	37.0	37.0	37.0	37.0
4	36.5545	37.0	37.0	37.0	37.0	37.0
5	36.5495	37.0	37.0	37.0	37.0	37.0
6	36.529	37.0	37.0	37.0	37.0	37.0
7	36.3695	37.0	37.0	37.0	37.0	37.0
8	36.4755	37.0	37.0	37.0	37.0	37.0
9	36.5325	37.0	37.0	37.0	37.0	37.0
10-14	36.558	37.0	37.0	37.0	37.0	37.0
15-19	36.5202	37.0	37.0	37.0	37.0	37.0
20-24	36.4431	37.0	37.0	37.0	37.0	37.0
25-29	36.372699999999995	37.0	37.0	37.0	37.0	37.0
30-34	36.395599999999995	37.0	37.0	37.0	37.0	37.0
35-39	36.3868	37.0	37.0	37.0	37.0	37.0
40-44	36.352	37.0	37.0	37.0	37.0	37.0
45-49	36.3183	37.0	37.0	37.0	37.0	37.0
50-54	36.3151	37.0	37.0	37.0	37.0	37.0
55-59	36.32770000000001	37.0	37.0	37.0	37.0	37.0
60-64	36.2864	37.0	37.0	37.0	37.0	37.0
65-69	36.290400000000005	37.0	37.0	37.0	37.0	37.0
70-74	36.2743	37.0	37.0	37.0	37.0	37.0
75-79	36.191500000000005	37.0	37.0	37.0	37.0	37.0
80-84	36.1509	37.0	37.0	37.0	37.0	37.0
85-89	36.1271	37.0	37.0	37.0	37.0	37.0
90-94	36.13380000000001	37.0	37.0	37.0	37.0	37.0
95-99	36.0728	37.0	37.0	37.0	37.0	37.0
100-104	36.061400000000006	37.0	37.0	37.0	37.0	37.0
105-109	36.0958	37.0	37.0	37.0	37.0	37.0
110-114	35.963899999999995	37.0	37.0	37.0	37.0	37.0
115-119	36.007999999999996	37.0	37.0	37.0	37.0	37.0
120-124	35.9628	37.0	37.0	37.0	37.0	37.0
125-129	35.9395	37.0	37.0	37.0	37.0	37.0
130-134	35.9474	37.0	37.0	37.0	37.0	37.0
135-139	35.8814	37.0	37.0	37.0	37.0	37.0
140-144	35.740700000000004	37.0	37.0	37.0	37.0	37.0
145-149	35.6101	37.0	37.0	37.0	37.0	37.0
150-151	35.34075	37.0	37.0	37.0	31.0	37.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
24	1.0
25	5.0
26	5.0
27	13.0
28	14.0
29	26.0
30	25.0
31	37.0
32	56.0
33	80.0
34	122.0
35	365.0
36	2954.0
37	297.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	39.800000000000004	12.275	7.124999999999999	40.8
2	18.97590361445783	13.654618473895583	38.83032128514056	28.539156626506024
3	17.925	17.075000000000003	28.675	36.325
4	23.45	25.95	20.674999999999997	29.925
5	23.35	32.5	24.925	19.225
6	20.424999999999997	34.65	23.075000000000003	21.85
7	13.575000000000001	27.175	42.075	17.175
8	17.025000000000002	26.325	32.425	24.224999999999998
9	17.5	22.625	36.375	23.5
10-14	19.24	29.465000000000003	28.725	22.57
15-19	19.075	28.299999999999997	27.88	24.745
20-24	19.495	29.049999999999997	27.43	24.025
25-29	19.625	28.71	27.66	24.005000000000003
30-34	19.37	29.09	27.73	23.810000000000002
35-39	20.16	28.000000000000004	27.62	24.22
40-44	20.415	28.915000000000003	27.16	23.51
45-49	19.685	29.025000000000002	27.944999999999997	23.345
50-54	20.02	28.494999999999997	27.49	23.995
55-59	20.585	28.715000000000003	27.525	23.175
60-64	20.315	28.485	28.389999999999997	22.81
65-69	20.73	28.595	28.29	22.384999999999998
70-74	20.599999999999998	28.804999999999996	27.26	23.335
75-79	20.13	28.235	28.000000000000004	23.635
80-84	20.405	29.24	27.6	22.755
85-89	19.415	28.825	27.73	24.03
90-94	20.549999999999997	27.99	27.58	23.880000000000003
95-99	20.4	27.755000000000003	28.025	23.82
100-104	20.205000000000002	29.525000000000002	27.205000000000002	23.064999999999998
105-109	20.674999999999997	28.799999999999997	27.57	22.955000000000002
110-114	20.14	28.77	27.555000000000003	23.535
115-119	20.47	27.99	27.634999999999998	23.905
120-124	21.15	27.975	26.840000000000003	24.035
125-129	20.535	28.625	27.134999999999998	23.705000000000002
130-134	20.31	28.515	27.485	23.69
135-139	21.015	27.82	27.54	23.625
140-144	20.76	28.59	27.26	23.39
145-149	20.23	29.585	26.71	23.474999999999998
150-151	20.375	28.549999999999997	26.35	24.725
>>END_MODULE
>>Per sequence GC content	warn
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.5
7	0.5
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.5
18	2.0
19	1.5
20	2.0
21	5.0
22	5.0
23	3.5
24	2.0
25	2.5
26	5.5
27	8.0
28	16.5
29	16.5
30	12.5
31	23.0
32	29.5
33	39.0
34	67.0
35	83.5
36	88.0
37	92.5
38	111.5
39	143.5
40	181.5
41	219.0
42	262.5
43	271.0
44	268.5
45	298.5
46	288.5
47	248.5
48	210.0
49	175.0
50	152.5
51	153.5
52	132.0
53	99.0
54	76.0
55	50.5
56	37.5
57	25.5
58	24.0
59	26.0
60	14.5
61	6.0
62	6.0
63	5.5
64	2.5
65	1.0
66	0.5
67	1.5
68	1.5
69	0.0
70	0.0
71	0.0
72	0.0
73	0.0
74	0.0
75	0.0
76	0.0
77	0.0
78	0.0
79	0.0
80	0.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.4
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.0
25-29	0.0
30-34	0.0
35-39	0.0
40-44	0.0
45-49	0.0
50-54	0.0
55-59	0.0
60-64	0.0
65-69	0.0
70-74	0.0
75-79	0.0
80-84	0.0
85-89	0.0
90-94	0.0
95-99	0.0
100-104	0.0
105-109	0.0
110-114	0.0
115-119	0.0
120-124	0.0
125-129	0.0
130-134	0.0
135-139	0.0
140-144	0.0
145-149	0.0
150-151	0.0
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
151	4000.0
>>END_MODULE
>>Sequence Duplication Levels	pass
#Total Deduplicated Percentage	70.1
#Duplication Level	Percentage of deduplicated	Percentage of total
1	71.64764621968617	50.224999999999994
2	19.293865905848786	27.05
3	5.741797432239657	12.075
4	2.1398002853067046	6.0
5	0.7132667617689016	2.5
6	0.24964336661911554	1.05
7	0.14265335235378032	0.7000000000000001
8	0.07132667617689016	0.4
9	0.0	0.0
>10	0.0	0.0
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	warn
#Sequence	Count	Percentage	Possible Source
GGAGCAATTCACCTTCAAGCTTTACCTCTCTCTCCTCCAATTCTCTTACT	8	0.2	No Hit
CAACAATTGAACAAGATTCTCATGATGCAAAGATTTCAGGTTGAAGATTT	8	0.2	No Hit
GTTTAATAAAGAAAGAAACACTTGGCTCTCTGCACAGAAGATTACGAGTT	7	0.17500000000000002	No Hit
GTTCTGGTGTTTCTGAATAGAATGAAATGAGATTGTTTCGCATATCAATG	7	0.17500000000000002	No Hit
ATCAACTAGGTCAGTGACATCGATATAGTCGCGTACACATGTGCCATCAG	7	0.17500000000000002	No Hit
GTTGAAACATATATTGCTAGAGCATAACATTCAAAAGAAGCTGAATAATC	7	0.17500000000000002	No Hit
AGCCAATCCAGCTACCCTTTTGACTAAGTTTAGATTGTTCTGTCTCTGAC	6	0.15	No Hit
TGTGGGTCCGCTAAATGCCAACACATCAGCGAATTTTGTGCTGACCTTTG	6	0.15	No Hit
GTGGTCTAAACATCCTTGACAACAAGATCACCGTTGACAAACTCTCTGTA	6	0.15	No Hit
CCTCAGGAGGCTGGACCAGCTTCCGGTTGTGTGGTGCTGTCATCTCCTTC	6	0.15	No Hit
GTACTCTTCTAAAGAAAGTGTTACACTGGTAGGTGTATCCACATCACTGG	6	0.15	No Hit
CTTGGGGATAACTTTGCCTTTTTCTTGTCTTATTATGTTCCAGAACTCGT	6	0.15	No Hit
GTGGATGTTTGTTGTCGCCCCCCACCCCCAACATCGATGGTGTCAGGAAG	6	0.15	No Hit
GTAGCACCAGTAATCATGTTCTTAACATAATCAGCATGACCAGGACAATC	5	0.125	No Hit
CTTGAACAATATATCACAGGAAACTTCACTAAAAATTGACCATGAAAAAA	5	0.125	No Hit
GTGCGGAAAGATGACGGCGGATGCAGAAGGTGGAGCTCCAGAGGTTACTC	5	0.125	No Hit
CAAACAAGGTTTCCTTCACCCACGGTCAATGCCTCTTTCCTTCTCATGCT	5	0.125	No Hit
CAGAAATCAAAAGGGGATCCACACTGAACTAAGATCGCCACTCAAGAGGA	5	0.125	No Hit
GTTCGGCGCTTCATATCCATAAACATCAGAGACAAGAAGAATGGCAAGTT	5	0.125	No Hit
GTTCTGCCAAGGATCCATGCTCCATGTACTTGTATACCAAAAGCCTGTGC	5	0.125	No Hit
GTGGATTTATGAGAGGTTGAGAGAGTATTCGGAGGAGAGGGGAGTGCTCG	5	0.125	No Hit
CTTTAAAAAAAAATAAACATTTGTTGTCCATCCCCTTAAGAAATTAAAAA	5	0.125	No Hit
GCTAGATTTCATAAACTTCTTCAGCAAAAGAACCACGATTGCAATGGCGA	5	0.125	No Hit
CTTAGAAAGTGCTTCTCCTTACACACCCACAAGCCTAGAAAAGGAATTAG	5	0.125	No Hit
TATATTTCTTCAAGTTCCTCTTTGCTCGAAATTGACCAAGTTTGTCTCTC	5	0.125	No Hit
CTTTACCTTTTTCTTCAACCACAAAAGCTGACACAGGGAAAGTCCTGTAG	5	0.125	No Hit
CGCTAATCGCCAGTGTCAAACGAGCCTTCCTTTCGGTCCTACTCCTATGA	5	0.125	No Hit
CGACATCTTTAAATAAAAAGGCATGCTCTCAACTTCCCAGAGTAAGTTAT	5	0.125	No Hit
GGTGTCTCCAAGGGCATGGACGTGGAAGCCATGAAGGCCTGGCTTAAGAC	5	0.125	No Hit
CTCAAGTCCATTCCAGATCCACCAATCCATATGTATTCAGCAATGATCTT	5	0.125	No Hit
TCCACGATTAGTTCATCAACTCCCCAGTCTTCATAACTTCCATCAGGCAA	5	0.125	No Hit
ACCTGATGCAGCCAATCCACCAAGTCCAAGCCCAACGATCACCCCTTTGG	5	0.125	No Hit
CCCAAAATTCCATTCTGCACAGACATAAGGTCCAATGCGGAGATGAACAT	5	0.125	No Hit
>>END_MODULE
>>Adapter Content	warn
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10-11	0.0	0.0	0.0	0.0	0.0
12-13	0.0	0.0	0.0	0.0	0.0
14-15	0.0	0.0	0.0	0.0	0.0
16-17	0.0	0.0	0.0	0.0	0.0
18-19	0.0	0.0	0.0	0.0	0.0
20-21	0.0	0.0	0.0	0.0	0.0
22-23	0.0	0.0	0.0	0.0	0.0
24-25	0.0	0.0	0.0	0.0	0.0
26-27	0.0	0.0	0.0	0.0	0.0
28-29	0.0	0.0	0.0	0.0	0.0
30-31	0.0	0.0	0.0	0.0	0.0
32-33	0.0	0.0	0.0	0.0	0.0
34-35	0.0	0.0	0.0	0.0	0.0
36-37	0.0	0.0	0.0	0.0	0.0
38-39	0.0	0.0	0.0	0.0	0.0
40-41	0.0	0.0	0.0	0.0	0.0
42-43	0.0	0.0	0.0	0.0	0.0
44-45	0.0	0.0	0.0	0.0	0.0
46-47	0.0	0.0	0.0	0.0	0.0
48-49	0.0	0.0	0.0	0.0	0.0
50-51	0.0	0.0	0.0	0.0	0.0
52-53	0.0	0.0	0.0	0.0	0.0
54-55	0.0	0.0	0.0	0.0	0.0
56-57	0.0	0.0	0.0	0.0	0.0
58-59	0.0	0.0	0.0	0.0	0.0
60-61	0.0	0.0	0.0	0.0	0.0
62-63	0.0	0.0	0.0	0.0	0.0
64-65	0.0	0.0	0.0	0.0	0.0
66-67	0.025	0.0	0.0	0.0	0.0
68-69	0.025	0.0	0.0	0.0	0.0
70-71	0.025	0.0	0.0	0.0	0.0
72-73	0.025	0.0	0.0	0.0	0.0
74-75	0.025	0.0	0.0	0.0	0.0
76-77	0.025	0.0	0.0	0.0	0.0
78-79	0.025	0.0	0.0	0.0	0.0
80-81	0.025	0.0	0.0	0.0	0.0
82-83	0.2	0.0	0.0	0.0	0.0
84-85	0.225	0.0	0.0	0.0	0.0
86-87	0.25	0.0	0.0	0.0	0.0
88-89	0.2625	0.0	0.0	0.0	0.0
90-91	0.3125	0.0	0.0	0.0	0.0
92-93	0.375	0.0	0.0	0.0	0.0
94-95	0.3875	0.0	0.0	0.0	0.0
96-97	0.475	0.0	0.0	0.0	0.0
98-99	0.55	0.0	0.0	0.0	0.0
100-101	0.7625	0.0	0.0	0.0	0.0
102-103	0.8500000000000001	0.0	0.0	0.0	0.0
104-105	1.0625	0.0	0.0	0.0	0.0
106-107	1.175	0.0	0.0	0.0	0.0
108-109	1.35	0.0	0.0	0.0	0.0
110-111	1.5625	0.0	0.0	0.0	0.0
112-113	1.75	0.0	0.0	0.0	0.0
114-115	1.9625	0.0	0.0	0.0	0.0
116-117	2.2625	0.0	0.0	0.0	0.0
118-119	2.4875	0.0	0.0	0.0	0.0
120-121	2.6875	0.0	0.0	0.0	0.0
122-123	2.95	0.0	0.0	0.0	0.0
124-125	3.175	0.0	0.0	0.0	0.0
126-127	3.4	0.0	0.0	0.0	0.0
128-129	3.7875	0.0	0.0	0.0	0.0
130-131	3.9124999999999996	0.0	0.0	0.0	0.0
132-133	4.2125	0.0	0.0	0.0	0.0
134-135	4.75	0.0	0.0	0.0	0.0
136-137	5.3125	0.0	0.0	0.0	0.0
138-139	5.7625	0.0	0.0	0.0	0.0
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTCCGG	10	0.006830828	145.0	7
TTCCGGC	10	0.006830828	145.0	8
GTTTCCG	10	0.006830828	145.0	6
TCCGGCA	10	0.006830828	145.0	9
CGGTTTC	10	0.006830828	145.0	4
CCGGTTT	10	0.006830828	145.0	3
>>END_MODULE
SRR13695471 read2 length is 151 nt
##FastQC	0.11.5
>>Basic Statistics	pass
#Measure	Value
Filename	SRR13695471_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4000
Sequences flagged as poor quality	0
Sequence length	151
%GC	44
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	36.10225	37.0	37.0	37.0	37.0	37.0
2	36.249	37.0	37.0	37.0	37.0	37.0
3	36.172	37.0	37.0	37.0	37.0	37.0
4	36.344	37.0	37.0	37.0	37.0	37.0
5	36.254	37.0	37.0	37.0	37.0	37.0
6	36.2645	37.0	37.0	37.0	37.0	37.0
7	36.3315	37.0	37.0	37.0	37.0	37.0
8	36.371	37.0	37.0	37.0	37.0	37.0
9	36.283	37.0	37.0	37.0	37.0	37.0
10-14	36.2568	37.0	37.0	37.0	37.0	37.0
15-19	36.2444	37.0	37.0	37.0	37.0	37.0
20-24	36.2452	37.0	37.0	37.0	37.0	37.0
25-29	36.1892	37.0	37.0	37.0	37.0	37.0
30-34	36.16245	37.0	37.0	37.0	37.0	37.0
35-39	36.0524	37.0	37.0	37.0	37.0	37.0
40-44	36.1178	37.0	37.0	37.0	37.0	37.0
45-49	36.0893	37.0	37.0	37.0	37.0	37.0
50-54	36.0273	37.0	37.0	37.0	37.0	37.0
55-59	36.03	37.0	37.0	37.0	37.0	37.0
60-64	36.005100000000006	37.0	37.0	37.0	37.0	37.0
65-69	35.96685	37.0	37.0	37.0	37.0	37.0
70-74	35.924600000000005	37.0	37.0	37.0	37.0	37.0
75-79	35.9146	37.0	37.0	37.0	37.0	37.0
80-84	35.92385	37.0	37.0	37.0	37.0	37.0
85-89	35.8089	37.0	37.0	37.0	37.0	37.0
90-94	35.83165	37.0	37.0	37.0	37.0	37.0
95-99	35.80775	37.0	37.0	37.0	37.0	37.0
100-104	35.763099999999994	37.0	37.0	37.0	37.0	37.0
105-109	35.775400000000005	37.0	37.0	37.0	37.0	37.0
110-114	35.6712	37.0	37.0	37.0	37.0	37.0
115-119	35.6658	37.0	37.0	37.0	37.0	37.0
120-124	35.661	37.0	37.0	37.0	37.0	37.0
125-129	35.59875	37.0	37.0	37.0	37.0	37.0
130-134	35.48855	37.0	37.0	37.0	37.0	37.0
135-139	35.57860000000001	37.0	37.0	37.0	37.0	37.0
140-144	35.445100000000004	37.0	37.0	37.0	37.0	37.0
145-149	35.3309	37.0	37.0	37.0	32.2	37.0
150-151	35.054625	37.0	37.0	37.0	31.0	37.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
6	1.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	3.0
14	1.0
15	6.0
16	1.0
17	0.0
18	0.0
19	1.0
20	2.0
21	0.0
22	4.0
23	2.0
24	1.0
25	8.0
26	11.0
27	13.0
28	9.0
29	22.0
30	30.0
31	40.0
32	68.0
33	118.0
34	182.0
35	545.0
36	2691.0
37	241.0
>>END_MODULE
>>Per base sequence content	warn
#Base	G	A	T	C
1	39.70920030082728	22.286287290047632	10.629230383554775	27.375282025570318
2	27.450000000000003	23.95	32.725	15.875
3	22.175	26.85	30.0	20.974999999999998
4	25.45	33.175	22.55	18.825
5	24.224999999999998	37.35	22.175	16.25
6	20.349999999999998	38.975	23.625	17.05
7	20.075000000000003	21.775	38.5	19.650000000000002
8	20.925	25.2	29.45	24.425
9	21.4	26.224999999999998	30.85	21.525
10-14	23.445	29.085	26.93	20.54
15-19	22.38	28.17	28.799999999999997	20.65
20-24	23.121936580974292	28.763629088726617	27.293187956386916	20.821246373912174
25-29	22.576288144072034	27.72886443221611	28.499249624812407	21.19559779889945
30-34	22.700215096793556	29.503276474413486	27.10719823920764	20.689310189585314
35-39	22.58177453235971	28.048414524357305	28.258477543262977	21.111333400020005
40-44	23.07923169267707	27.761104441776713	28.666466586634655	20.493197278911566
45-49	22.398959583833534	27.43097238895558	29.081632653061224	21.08843537414966
50-54	23.56707012103631	28.183455036510953	27.478243473041914	20.771231369410824
55-59	23.39669834917459	27.668834417208604	27.963981990995496	20.97048524262131
60-64	22.64179253776133	27.758327498249475	28.543563068920676	21.05631689506852
65-69	22.91072768192048	28.012003000750184	27.236809202300577	21.840460115028755
70-74	22.736368184092047	28.019009504752372	27.54377188594297	21.700850425212607
75-79	23.216608304152075	27.48874437218609	27.71385692846423	21.5807903951976
80-84	22.93573393348337	27.926981745436358	27.82195548887222	21.315328832208053
85-89	23.001500750375186	28.734367183591797	27.2736368184092	20.990495247623812
90-94	23.478217376081627	27.924773670784774	27.95478417446106	20.642224778672535
95-99	22.50287600660231	28.615015255339372	27.61466513279648	21.26744360526184
100-104	23.736868434217108	26.663331665832917	28.849424712356175	20.750375187593797
105-109	23.2016008004002	27.473736868434216	28.494247123561784	20.830415207603803
110-114	23.221966589976994	27.853356006802038	28.64359307792338	20.281084325297588
115-119	23.676838419209606	27.24862431215608	28.029014507253624	21.045522761380692
120-124	24.607303651825912	27.893946973486745	26.7983991995998	20.700350175087546
125-129	24.34095342904307	27.922565154319447	27.262268020609277	20.47421339602821
130-134	24.283355845715143	27.905347941367754	27.890339686827755	19.92095652608935
135-139	24.082041020510257	28.174087043521762	26.97848924462231	20.765382691345675
140-144	24.25227568270481	27.068120436130837	27.89336801040312	20.786235870761228
145-149	24.732366183091546	28.479239619809903	27.333666833416707	19.45472736368184
150-151	24.853033145716072	27.70481550969356	27.31707317073171	20.12507817385866
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.5
9	0.5
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.5
16	0.5
17	0.0
18	0.0
19	0.0
20	1.0
21	1.0
22	3.0
23	3.5
24	3.0
25	4.0
26	8.5
27	11.5
28	10.0
29	12.5
30	20.0
31	21.0
32	20.5
33	42.0
34	54.5
35	71.0
36	85.0
37	96.5
38	140.5
39	173.0
40	206.0
41	222.0
42	229.5
43	266.5
44	285.5
45	271.0
46	269.5
47	257.5
48	226.0
49	183.0
50	154.0
51	140.0
52	105.0
53	90.5
54	73.0
55	62.5
56	56.0
57	34.0
58	19.0
59	12.0
60	15.0
61	12.5
62	6.0
63	7.5
64	5.5
65	1.0
66	0.0
67	0.5
68	0.5
69	1.0
70	1.0
71	0.0
72	0.0
73	0.0
74	0.0
75	0.0
76	0.0
77	0.0
78	0.0
79	0.0
80	0.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.5
88	0.5
89	0.0
90	0.0
91	0.0
92	0.5
93	0.5
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.5
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.27499999999999997
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.03
25-29	0.05
30-34	0.045
35-39	0.03
40-44	0.04
45-49	0.04
50-54	0.03
55-59	0.05
60-64	0.03
65-69	0.025
70-74	0.05
75-79	0.05
80-84	0.025
85-89	0.05
90-94	0.034999999999999996
95-99	0.034999999999999996
100-104	0.05
105-109	0.05
110-114	0.03
115-119	0.05
120-124	0.05
125-129	0.045
130-134	0.055
135-139	0.05
140-144	0.03
145-149	0.05
150-151	0.0625
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
151	4000.0
>>END_MODULE
>>Sequence Duplication Levels	pass
#Total Deduplicated Percentage	70.05
#Duplication Level	Percentage of deduplicated	Percentage of total
1	71.87723054960742	50.349999999999994
2	18.843683083511777	26.400000000000002
3	5.924339757316202	12.45
4	2.212705210563883	6.2
5	0.6423982869379015	2.25
6	0.21413276231263384	0.8999999999999999
7	0.21413276231263384	1.05
8	0.07137758743754462	0.4
9	0.0	0.0
>10	0.0	0.0
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	warn
#Sequence	Count	Percentage	Possible Source
GGGGACGCTTTGGAATAGTATACAAGGCTGAATTGCCGAACGAGATAAAA	8	0.2	No Hit
ATCGATTATCCATTACCTGGGGAAAAGTTTGACCAAGCAGAGAAGGACAA	8	0.2	No Hit
GGCAATAGTCGAGTGGTTTCTGAGAAGAAAGCAAAGGCATGGTGTGCTGC	7	0.17500000000000002	No Hit
GGAAAACACTGGACTTGAAGGTCAGATTCCTCCTACCCTCTTCGATCTTC	7	0.17500000000000002	No Hit
CTTATGGCGATGGACGCTGGAACCCATCAACGATTATTCAGCTTCTTTTG	7	0.17500000000000002	No Hit
CTCAATCACAGCCATTGCGCCATAACTTCTTTAGTCCCTTCACAGTTCAT	7	0.17500000000000002	No Hit
ATGTTATCTGATCATAGAATAGCAGCCGTTAAGCGACTGAATGATGCTTA	7	0.17500000000000002	No Hit
ATGGCTGTCATGATCCTAAGATACTTCAATGTTATTGGGTCTGACCCGGA	7	0.17500000000000002	No Hit
TATCAGTTAAAGCTGTTCTGTGATAAAGATTACCCGGAGAAGCCACCAAG	6	0.15	No Hit
CTTGTTTTCTGCTACGTATGTGCCACGACTACGTGGCAGTGCTAGCAAAC	6	0.15	No Hit
GATGATGCCATGGTGGAGAAAAACGTGTTAGATCCATCAGCACCTTGCAT	6	0.15	No Hit
GAGTAGATTACTTGCAGCTCAAAAGGAGATAGAAGCTTCCAGGGCCTCTG	6	0.15	No Hit
GAGTTACTTGATTGCTATAAGTGACGAGAAGAAGCCAGCAATGAAGGAGA	6	0.15	No Hit
CAACAGTAGCATACCTTTTTCTAGTGATCTTAAAGATACTACTCTTCGTG	6	0.15	No Hit
CCACGCCTTCCTTTCTCTACCACTCACCTCTCCTCTCCTCTTGATTATTT	5	0.125	No Hit
CCCGCATACTCTTCCAAAAATGGTGTGTTTTCCATCTAGAGATGGAGTCG	5	0.125	No Hit
CTCACTTTCTTAAAAAAAAAAAATAACAATAAAATGCAAACGCTACTCCT	5	0.125	No Hit
AAGCCAGCCTCCCCTTCTCAATTAATAAGCGAAGCCCCTCCTCCTCTAGG	5	0.125	No Hit
CATCCACCCCTACTTTCTCCCTAACACCCACCTCGAAACTCCCCTCAAAA	5	0.125	No Hit
GTTTTATCACCTCTACAATCAGTTGGCTACCAATACCTTGGAGAGGGTTG	5	0.125	No Hit
GGGGAACCAATTGAAACTGAAGACAAAGAGGAACAGGAACCAGTGGAGCG	5	0.125	No Hit
GAATAATGGTGAAGGCTGTAGCTGTTCTTAATAGCAGTGAAGGTGTGAGT	5	0.125	No Hit
TGTGAACCTGCTTTTGCTGCGCAACAAATCGCTGAAATAGCAGAAGGTGA	5	0.125	No Hit
GAGGCTGTAACTGCTGCTGAAGACCTTCCAAATCCAGCTGTTGGTGAAAT	5	0.125	No Hit
GTCTTTTGCCCTTGCACGATATTGTAGAGTGCGGGATTGTGAGGGAGACA	5	0.125	No Hit
GTTGAATCAAGAAAAAATGGCAGGGCCTCAGTGCTGTGCTCACCCACCAA	5	0.125	No Hit
TTTAGATTTAGATAAAGTGATTAGTACTGAGGTTTCGAGGCCAAAGAAAT	5	0.125	No Hit
GGTGTACTCACTGCTGAGGATGCAAGGCTTTCAGTTCAAGCTGGAGCAGC	5	0.125	No Hit
AGTTCTTAACCCTCTTCTTGATGGTCTTGATTGTTGGTTCTAAGCTGATC	5	0.125	No Hit
GTGGAATTGAAGATGAGCTGCTTCAGCCTCAATTTAGTATTGGGTTGAAG	5	0.125	No Hit
AGGAAGACAAAGCAAGACATAAACCTACCAGTGATTCAATCAAGCACAAG	5	0.125	No Hit
GCAAAGGTAGATTATTGATAATAAATGGTGAAATTGCATTATTTTAGGTT	5	0.125	No Hit
>>END_MODULE
>>Adapter Content	warn
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10-11	0.0	0.0	0.0	0.0	0.0
12-13	0.0	0.0	0.0	0.0	0.0
14-15	0.0	0.0	0.0	0.0	0.0
16-17	0.0	0.0	0.0	0.0	0.0
18-19	0.0	0.0	0.0	0.0	0.0
20-21	0.0	0.0	0.0	0.0	0.0
22-23	0.0	0.0	0.0	0.0	0.0
24-25	0.0	0.0	0.0	0.0	0.0
26-27	0.0	0.0	0.0	0.0	0.0
28-29	0.0	0.0	0.0	0.0	0.0
30-31	0.0	0.0	0.0	0.0	0.0
32-33	0.0	0.0	0.0	0.0	0.0
34-35	0.0	0.0	0.0	0.0	0.0
36-37	0.0	0.0	0.0	0.0	0.0
38-39	0.0	0.0	0.0	0.0	0.0
40-41	0.0	0.0	0.0	0.0	0.0
42-43	0.0	0.0	0.0	0.0	0.0
44-45	0.0	0.0	0.0	0.0	0.0
46-47	0.0	0.0	0.0	0.0	0.0
48-49	0.0	0.0	0.0	0.0	0.0
50-51	0.0	0.0	0.0	0.0	0.0
52-53	0.0	0.0	0.0	0.0	0.0
54-55	0.0	0.0	0.0	0.0	0.0
56-57	0.0	0.0	0.0	0.0	0.0
58-59	0.0	0.0	0.0	0.0	0.0
60-61	0.0	0.0	0.0	0.0	0.0
62-63	0.0	0.0	0.0	0.0	0.0
64-65	0.0	0.0	0.0	0.0	0.0
66-67	0.025	0.0	0.0	0.0	0.0
68-69	0.025	0.0	0.0	0.0	0.0
70-71	0.025	0.0	0.0	0.0	0.0
72-73	0.025	0.0	0.0	0.0	0.0
74-75	0.025	0.0	0.0	0.0	0.0
76-77	0.025	0.0	0.0	0.0	0.0
78-79	0.025	0.0	0.0	0.0	0.0
80-81	0.025	0.0	0.0	0.0	0.0
82-83	0.2	0.0	0.0	0.0	0.0
84-85	0.225	0.0	0.0	0.0	0.0
86-87	0.2625	0.0	0.0	0.0	0.0
88-89	0.2875	0.0	0.0	0.0	0.0
90-91	0.3375	0.0	0.0	0.0	0.0
92-93	0.4	0.0	0.0	0.0	0.0
94-95	0.4125	0.0	0.0	0.0	0.0
96-97	0.5	0.0	0.0	0.0	0.0
98-99	0.575	0.0	0.0	0.0	0.0
100-101	0.7875	0.0	0.0	0.0	0.0
102-103	0.875	0.0	0.0	0.0	0.0
104-105	1.0875	0.0	0.0	0.0	0.0
106-107	1.2	0.0	0.0	0.0	0.0
108-109	1.375	0.0	0.0	0.0	0.0
110-111	1.5875	0.0	0.0	0.0	0.0
112-113	1.775	0.0	0.0	0.0	0.0
114-115	1.9875	0.0	0.0	0.0	0.0
116-117	2.2875	0.0	0.0	0.0	0.0
118-119	2.5125	0.0	0.0	0.0	0.0
120-121	2.7125	0.0	0.0	0.0	0.0
122-123	2.9749999999999996	0.0	0.0	0.0	0.0
124-125	3.225	0.0	0.0	0.0	0.0
126-127	3.45	0.0	0.0	0.0	0.0
128-129	3.8375	0.0	0.0	0.0	0.0
130-131	3.9625000000000004	0.0	0.0	0.0	0.0
132-133	4.2625	0.0	0.0	0.0	0.0
134-135	4.8125	0.0	0.0	0.0	0.0
136-137	5.375	0.0	0.0	0.0	0.0
138-139	5.8125	0.0	0.0	0.0	0.0
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTATT	10	0.006830828	145.0	5
CCGCCGT	10	0.006830828	145.0	1
CCGTTAT	10	0.006830828	145.0	4
GCCGTTA	10	0.006830828	145.0	3
AAAATCA	10	0.006830828	145.0	4
CGCCGTT	10	0.006830828	145.0	2
>>END_MODULE
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786015 spots for SRR13695471.sra
Written 786015 spots for SRR13695471.sra
Read 786033 spots for SRR13695471.sra
Written 786033 spots for SRR13695471.sra
SRR ids: ['SRR13695471.sra']
extra args: ['--split-files', '--defline-qual', '+']
tempdir: /tmp/pfd_3g3t4pfb
SRR13695471.sra spots: 15720318
blocks: [[1, 786015], [786016, 1572030], [1572031, 2358045], [2358046, 3144060], [3144061, 3930075], [3930076, 4716090], [4716091, 5502105], [5502106, 6288120], [6288121, 7074135], [7074136, 7860150], [7860151, 8646165], [8646166, 9432180], [9432181, 10218195], [10218196, 11004210], [11004211, 11790225], [11790226, 12576240], [12576241, 13362255], [13362256, 14148270], [14148271, 14934285], [14934286, 15720318]]
SRR13695471 file size 5320751
SRR13695471 completed basic pipeline successfully
skewer v0.2.2 [April 4, 2016]
COMMAND LINE:	skewer -f sanger -l 18 -q 10 -k inf -t 20 -o SRR13695471 SRR13695471_1.fastq SRR13695471_2.fastq
Input file:	SRR13695471_1.fastq
Paired file:	SRR13695471_2.fastq
trimmed:	SRR13695471-trimmed-pair1.fastq, SRR13695471-trimmed-pair2.fastq

Parameters used:
-- 3' end adapter sequence (-x):	AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC
-- paired 3' end adapter sequence (-y):	AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTA
-- maximum error ratio allowed (-r):	0.100
-- maximum indel error ratio allowed (-d):	0.030
-- end quality threshold (-q):		10
-- minimum read length allowed after trimming (-l):	18
-- file format (-f):		Sanger/Illumina 1.8+ FASTQ 
-- number of concurrent threads (-t):	20
Wed Feb 12 06:02:54 2025 >> started

Wed Feb 12 06:03:11 2025 >> done (17.048s)
15720318 read pairs processed; of these:
     104 ( 0.00%) short read pairs filtered out after trimming by size control
     689 ( 0.00%) empty read pairs filtered out after trimming by size control
15719525 (99.99%) read pairs available; of these:
 1424785 ( 9.06%) trimmed read pairs available after processing
14294740 (90.94%) untrimmed read pairs available after processing

Length distribution of reads after trimming:
length	count	percentage
 18	       1	  0.00%
 19	       2	  0.00%
 20	       1	  0.00%
 21	       0	  0.00%
 22	       2	  0.00%
 23	       5	  0.00%
 24	       4	  0.00%
 25	       5	  0.00%
 26	       2	  0.00%
 27	       2	  0.00%
 28	       1	  0.00%
 29	       3	  0.00%
 30	       1	  0.00%
 31	       1	  0.00%
 32	       4	  0.00%
 33	       6	  0.00%
 34	       8	  0.00%
 35	       4	  0.00%
 36	       4	  0.00%
 37	       7	  0.00%
 38	       5	  0.00%
 39	       6	  0.00%
 40	       4	  0.00%
 41	       6	  0.00%
 42	       8	  0.00%
 43	      10	  0.00%
 44	      12	  0.00%
 45	      15	  0.00%
 46	      17	  0.00%
 47	      13	  0.00%
 48	      27	  0.00%
 49	      30	  0.00%
 50	      43	  0.00%
 51	      19	  0.00%
 52	      46	  0.00%
 53	      31	  0.00%
 54	      53	  0.00%
 55	      50	  0.00%
 56	      69	  0.00%
 57	      81	  0.00%
 58	      67	  0.00%
 59	     103	  0.00%
 60	     120	  0.00%
 61	     142	  0.00%
 62	     162	  0.00%
 63	     181	  0.00%
 64	     206	  0.00%
 65	     213	  0.00%
 66	     302	  0.00%
 67	     293	  0.00%
 68	     378	  0.00%
 69	     408	  0.00%
 70	     448	  0.00%
 71	     577	  0.00%
 72	     644	  0.00%
 73	     712	  0.00%
 74	     821	  0.01%
 75	     886	  0.01%
 76	     982	  0.01%
 77	    1198	  0.01%
 78	    1243	  0.01%
 79	    1387	  0.01%
 80	    1651	  0.01%
 81	    1839	  0.01%
 82	    2057	  0.01%
 83	    2280	  0.01%
 84	    2664	  0.02%
 85	    2930	  0.02%
 86	    3209	  0.02%
 87	    3280	  0.02%
 88	    3785	  0.02%
 89	    4058	  0.03%
 90	    4518	  0.03%
 91	    4842	  0.03%
 92	    5040	  0.03%
 93	    5837	  0.04%
 94	    6197	  0.04%
 95	    6679	  0.04%
 96	    7322	  0.05%
 97	    7755	  0.05%
 98	    8241	  0.05%
 99	    8561	  0.05%
100	    9051	  0.06%
101	    9428	  0.06%
102	   10202	  0.06%
103	   10858	  0.07%
104	   11769	  0.07%
105	   12072	  0.08%
106	   12548	  0.08%
107	   13185	  0.08%
108	   13815	  0.09%
109	   14517	  0.09%
110	   15031	  0.10%
111	   15677	  0.10%
112	   16298	  0.10%
113	   16573	  0.11%
114	   17557	  0.11%
115	   18452	  0.12%
116	   18999	  0.12%
117	   19857	  0.13%
118	   20601	  0.13%
119	   20767	  0.13%
120	   21808	  0.14%
121	   22323	  0.14%
122	   23298	  0.15%
123	   23981	  0.15%
124	   24707	  0.16%
125	   25258	  0.16%
126	   26706	  0.17%
127	   26726	  0.17%
128	   27505	  0.17%
129	   28854	  0.18%
130	   28946	  0.18%
131	   29657	  0.19%
132	   30373	  0.19%
133	   31205	  0.20%
134	   31644	  0.20%
135	   32542	  0.21%
136	   33946	  0.22%
137	   33943	  0.22%
138	   34918	  0.22%
139	   36324	  0.23%
140	   37141	  0.24%
141	   37205	  0.24%
142	   37941	  0.24%
143	   39165	  0.25%
144	   40368	  0.26%
145	   41013	  0.26%
146	   41120	  0.26%
147	   42467	  0.27%
148	   43161	  0.27%
149	   44046	  0.28%
150	   44411	  0.28%
151	14294740	 90.94%
15719525 reads passed initial QC


criterion=sequence-density
sequence-density=0.37
sequence-density-rank=1
fanout-score=1.96
fanout-score-rank=29
prefix-density=0.38
prefix-fanout=1.9
sequence=CGGTAGACCCAACCTTTCTCCAACTCGAATTCCAAGCAAGGAACCCACTTCGAGCGAAGAAGGTAATCAATTTCCTTGGCCAATTCCTCCTCTGTGAGATCTGGAAGGTAAGAAAGAGTCTCGAACTTCTTCAATCCAGTTGGTGGCCACACCTGCATGCATTGAACTC


criterion=fanout-score
sequence-density=0.10
sequence-density-rank=23
fanout-score=8.83
fanout-score-rank=1
prefix-density=0.18
prefix-fanout=4.9
sequence=GCAGCTTCCATCATCACTCCT


criterion=sequence-density
sequence-density=0.54
sequence-density-rank=1
fanout-score=2.21
fanout-score-rank=26
prefix-density=0.56
prefix-fanout=2.1
sequence=CCAAGTCTTTTAGTTCATCCATTTAAGCTTAATCAATCAATCATCATGTCTAGCACCTGCGACACCTGCGACTGCGCTGACAAGACCCAGTGTGTCAAGAAGGGAAGCAGCTACACTGCTGGCATCGTCGAGACTGAGAAGAACTATGTCTCCTCCGTAGTCATGGAGGTGCCAGCAGCTGAGAACGATGGCAAGTGCAACTGCGGTACTGGCTGCACTTGCACTACCTGCACATGCGGTCATTAAGCAAGCACATCAACTATCATGTTTGATGTGGGATTGGGAGTGGATTAATAATGTAATTTCTGATAAATAATCTGTGTTCTTCTGTACTTGTGGGTGTGGAGTGAACAAACAAAAGTGTCCGTGAGTGTCTTTATCTTTGTGTCTT


criterion=fanout-score
sequence-density=0.13
sequence-density-rank=26
fanout-score=34.06
fanout-score-rank=1
prefix-density=0.37
prefix-fanout=12.0
sequence=AAAGAAAAGAAAA
SRR13695471 testing PE reads STAR mapping to Ensembl genome
                                 Started job on |	Feb 12 06:04:09
                             Started mapping on |	Feb 12 06:04:10
                                    Finished on |	Feb 12 06:05:34
       Mapping speed, Million of reads per hour |	673.69

                          Number of input reads |	15719525
                      Average input read length |	289
                                    UNIQUE READS:
                   Uniquely mapped reads number |	13740020
                        Uniquely mapped reads % |	87.41%
                          Average mapped length |	289.59
                       Number of splices: Total |	13621367
            Number of splices: Annotated (sjdb) |	13328999
                       Number of splices: GT/AG |	13348691
                       Number of splices: GC/AG |	216905
                       Number of splices: AT/AC |	7066
               Number of splices: Non-canonical |	48705
                      Mismatch rate per base, % |	0.40%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.88
                        Insertion rate per base |	0.02%
                       Insertion average length |	2.45
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	346252
             % of reads mapped to multiple loci |	2.20%
        Number of reads mapped to too many loci |	105700
             % of reads mapped to too many loci |	0.67%
                                  UNMAPPED READS:
       % of reads unmapped: too many mismatches |	0.00%
                 % of reads unmapped: too short |	9.59%
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%
N_unmapped	1633423	1633423	1633423
N_multimapping	346252	346252	346252
N_noFeature	599477	13438300	777661
N_ambiguous	250202	3346	124016
UnstrandedReadsAssigned:12890341 PositiveStrandReadsAssigned:298374 NegativeStrandReadsAssigned:12838343
Dataset is classified negative stranded
MeadianReadLen=143 20thPercentileLength=143 echo kmer=139
SRR13695471 Starting Kallisto paired end mapping to ensembl reference transcriptome

[quant] fragment length distribution will be estimated from the data
[index] k-mer length: 31
[index] number of targets: 52,400
[index] number of k-mers: 62,057,036
[index] number of equivalence classes: 130,681
[quant] running in paired-end mode
[quant] will process pair 1: SRR13695471-trimmed-pair1.fastq
                             SRR13695471-trimmed-pair2.fastq
[quant] finding pseudoalignments for the reads ... done
[quant] processed 15,719,525 reads, 13,807,588 reads pseudoaligned
[quant] estimated average fragment length: 253.078
[   em] quantifying the abundances ... done
[   em] the Expectation-Maximization algorithm ran for 1,121 rounds

  52401 SRR13695471.ke.tsv
  34699 SRR13695471.se.tsv
  87100 total
==> SRR13695471.ke.tsv <==
target_id	length	eff_length	est_counts	tpm
Potri.005G200100.1.v4.1	2018	1765.92	497	19.426
Potri.005G024800.1.v4.1	1035	782.922	383	33.7659
Potri.004G059700.1.v4.1	961	709.13	6	0.584015
Potri.007G009000.2.v4.1	1416	1163.92	0	0
Potri.003G141000.2.v4.1	2943	2690.92	831.513	21.3288
Potri.016G087400.1.v4.1	270	85.9082	650	522.249
Potri.015G069301.1.v4.1	564	323.355	0	0
Potri.010G195200.1.v4.1	1773	1520.92	119	5.40056
Potri.012G127500.1.v4.1	977	725.037	126	11.9952

==> SRR13695471.se.tsv <==
Potri.001G166300.v4.1	0
Potri.001G448400.v4.1	132
Potri.001G233950.v4.1	1
Potri.001G122700.v4.1	203
Potri.001G212900.v4.1	1
Potri.001G182400.v4.1	1
Potri.001G256600.v4.1	0
Potri.001G040500.v4.1	6
Potri.001G416900.v4.1	0
Potri.001G452600.v4.1	8
SRR13695471 completed mapping pipeline successfully
