Starting /dee2/code/volunteer_pipeline.sh SRR14016361
    current disk space = 312078592
    free memory = 263381632 
SRR14016361 SRAfilesize
8f8bb76ca56620223a028a3dd415baea  SRR14016361.sra
SRR14016361.sra file validated
SRR14016361 is paired end
SRR14016361 is conventional basespace
SRR14016361 read1 length is 150 nt
##FastQC	0.11.5
>>Basic Statistics	pass
#Measure	Value
Filename	SRR14016361_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4000
Sequences flagged as poor quality	0
Sequence length	150
%GC	44
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	35.38125	37.0	37.0	37.0	37.0	37.0
2	34.9535	37.0	37.0	37.0	25.0	37.0
3	35.337	37.0	37.0	37.0	37.0	37.0
4	35.547	37.0	37.0	37.0	37.0	37.0
5	35.723	37.0	37.0	37.0	37.0	37.0
6	35.445	37.0	37.0	37.0	37.0	37.0
7	35.4065	37.0	37.0	37.0	37.0	37.0
8	35.684	37.0	37.0	37.0	37.0	37.0
9	35.399	37.0	37.0	37.0	37.0	37.0
10-14	35.5529	37.0	37.0	37.0	37.0	37.0
15-19	35.4991	37.0	37.0	37.0	37.0	37.0
20-24	35.4529	37.0	37.0	37.0	37.0	37.0
25-29	35.1301	37.0	37.0	37.0	25.0	37.0
30-34	35.0313	37.0	37.0	37.0	25.0	37.0
35-39	34.785700000000006	37.0	37.0	37.0	25.0	37.0
40-44	34.6765	37.0	37.0	37.0	25.0	37.0
45-49	34.3786	37.0	37.0	37.0	25.0	37.0
50-54	34.1222	37.0	37.0	37.0	25.0	37.0
55-59	33.3625	37.0	37.0	37.0	13.8	37.0
60-64	33.15695	37.0	37.0	37.0	11.0	37.0
65-69	32.548199999999994	37.0	37.0	37.0	11.0	37.0
70-74	32.2729	37.0	37.0	37.0	11.0	37.0
75-79	32.203	37.0	37.0	37.0	11.0	37.0
80-84	32.06395	37.0	37.0	37.0	11.0	37.0
85-89	31.7503	37.0	32.2	37.0	11.0	37.0
90-94	31.4142	37.0	25.0	37.0	11.0	37.0
95-99	30.973200000000002	37.0	25.0	37.0	11.0	37.0
100-104	30.2897	37.0	25.0	37.0	11.0	37.0
105-109	29.7579	37.0	25.0	37.0	11.0	37.0
110-114	29.005100000000006	37.0	11.0	37.0	11.0	37.0
115-119	28.425	37.0	11.0	37.0	11.0	37.0
120-124	27.913600000000002	37.0	11.0	37.0	11.0	37.0
125-129	27.371100000000002	37.0	11.0	37.0	11.0	37.0
130-134	26.9604	37.0	11.0	37.0	11.0	37.0
135-139	26.854499999999994	37.0	11.0	37.0	11.0	37.0
140-144	26.871299999999998	37.0	11.0	37.0	11.0	37.0
145-149	27.057350000000003	37.0	11.0	37.0	11.0	37.0
150	27.2805	37.0	11.0	37.0	11.0	37.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
19	3.0
20	8.0
21	33.0
22	80.0
23	121.0
24	175.0
25	171.0
26	181.0
27	163.0
28	175.0
29	130.0
30	147.0
31	199.0
32	490.0
33	431.0
34	272.0
35	306.0
36	860.0
37	55.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	28.335419274092615	23.103879849812266	14.317897371714643	34.242803504380475
2	15.19019019019019	24.674674674674673	34.65965965965966	25.475475475475474
3	19.55	22.925	34.075	23.45
4	19.400000000000002	36.35	19.375	24.875
5	20.65	41.675000000000004	19.5	18.175
6	24.45	28.65	27.750000000000004	19.15
7	19.3	23.625	28.775000000000002	28.299999999999997
8	24.2	29.599999999999998	23.549999999999997	22.650000000000002
9	22.35	22.25	35.275	20.125
10-14	21.185000000000002	29.7	25.82	23.294999999999998
15-19	24.755	27.235	24.59	23.419999999999998
20-24	24.145	28.79	27.315	19.75
25-29	21.14211421142114	28.372837283728376	27.122712271227122	23.362336233623363
30-34	22.40672201660498	27.813344003200964	29.028708612583777	20.75122536761028
35-39	18.78687868786879	26.962696269626964	33.4033403340334	20.84708470847085
40-44	21.182118211821184	25.257525752575255	34.3984398439844	19.161916191619163
45-49	19.798959791958392	26.405281056211244	35.00700140028006	18.78875775155031
50-54	20.362036203620363	26.767676767676768	34.1034103410341	18.76687668766877
55-59	22.36	27.084999999999997	31.319999999999997	19.235
60-64	22.191109555477773	29.406470323516174	29.50647532376619	18.89594479723986
65-69	22.82	29.785	28.415000000000003	18.98
70-74	22.865	32.015	25.235000000000003	19.885
75-79	23.14	31.974999999999998	24.08	20.805
80-84	23.211160558027903	31.291564578228908	25.326266313315664	20.171008550427523
85-89	23.044999999999998	31.514999999999997	24.095	21.345
90-94	22.855	30.620000000000005	24.235	22.29
95-99	22.36	32.035000000000004	23.52	22.085
100-104	22.009999999999998	32.785	23.565	21.64
105-109	22.830000000000002	31.65	24.474999999999998	21.044999999999998
110-114	23.51	31.255	24.48	20.755000000000003
115-119	25.825	30.37	24.44	19.365
120-124	27.595	30.165	24.060000000000002	18.18
125-129	28.970000000000002	30.72	23.25	17.06
130-134	32.035000000000004	30.080000000000002	22.264999999999997	15.620000000000001
135-139	34.65	28.849999999999998	21.025	15.475
140-144	36.693669366936696	28.91289128912891	20.7020702070207	13.691369136913693
145-149	41.05026256564141	27.481870467616904	18.95473868467117	12.513128282070518
150	45.4	24.2	16.8	13.600000000000001
>>END_MODULE
>>Per sequence GC content	fail
#GC Content	Count
0	0.0
1	1.0
2	1.5
3	3.0
4	3.0
5	1.5
6	3.0
7	4.0
8	4.5
9	4.5
10	7.5
11	9.0
12	11.0
13	15.5
14	18.0
15	17.5
16	20.5
17	31.0
18	34.0
19	36.0
20	39.0
21	42.0
22	43.5
23	40.0
24	39.0
25	46.0
26	47.5
27	47.0
28	48.5
29	48.5
30	55.0
31	49.5
32	51.5
33	64.0
34	73.5
35	69.0
36	67.0
37	74.0
38	74.5
39	69.0
40	67.0
41	81.5
42	80.5
43	82.0
44	97.5
45	105.5
46	131.0
47	153.5
48	147.0
49	148.0
50	155.5
51	170.5
52	194.5
53	178.5
54	133.5
55	105.5
56	103.0
57	102.5
58	90.0
59	85.0
60	80.5
61	54.5
62	30.0
63	24.5
64	24.5
65	25.5
66	17.0
67	7.0
68	3.5
69	2.5
70	1.5
71	0.5
72	0.5
73	0.0
74	1.0
75	1.0
76	0.0
77	0.0
78	0.0
79	0.0
80	0.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.125
2	0.1
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.0
25-29	0.01
30-34	0.03
35-39	0.01
40-44	0.01
45-49	0.02
50-54	0.01
55-59	0.0
60-64	0.005
65-69	0.0
70-74	0.0
75-79	0.0
80-84	0.005
85-89	0.0
90-94	0.0
95-99	0.0
100-104	0.0
105-109	0.0
110-114	0.0
115-119	0.0
120-124	0.0
125-129	0.0
130-134	0.0
135-139	0.0
140-144	0.01
145-149	0.025
150	0.0
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
150	4000.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Deduplicated Percentage	66.675
#Duplication Level	Percentage of deduplicated	Percentage of total
1	81.58980127484064	54.400000000000006
2	10.686164229471316	14.249999999999998
3	3.937007874015748	7.875
4	1.7622797150356206	4.7
5	0.7874015748031495	2.625
6	0.44994375703037126	1.7999999999999998
7	0.26246719160104987	1.225
8	0.11248593925759282	0.6
9	0.07499062617172854	0.44999999999999996
>10	0.26246719160104987	3.225
>50	0.0	0.0
>100	0.07499062617172854	8.85
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTT	205	5.125	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	149	3.7249999999999996	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGGCTTTAAG	41	1.0250000000000001	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	27	0.675	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGGAGAGGAC	15	0.375	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	12	0.3	No Hit
CAAATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACCGTGAGATTCAGT	12	0.3	No Hit
CTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTT	12	0.3	No Hit
CGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAAGCGGGC	10	0.25	No Hit
GCCAGAGGCTGGTGATGGGACCACCGAGATCTCACCCACTGGTGCTGCTG	9	0.22499999999999998	No Hit
ATTTTTTCTGGAACAGACCAAGAAGAAAGGCGTGAGGCGGCCACAACGCC	9	0.22499999999999998	No Hit
CTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGGAGCCTCCTACAAC	8	0.2	No Hit
CTACCGTGAGATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCCGCCCCTC	8	0.2	No Hit
ATTGCAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT	8	0.2	No Hit
GGTTCAAGAGCTTCCAGAAGAGAAATATGATTGAGCCCCGAGAACGAGCC	7	0.17500000000000002	No Hit
ACAGGCCCGACTCCTTAGCCCTCCCACACCAAAGGCCAAACCTGGGCCCC	7	0.17500000000000002	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7	0.17500000000000002	No Hit
GTGAGATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCCGCCCCTCAATAA	7	0.17500000000000002	No Hit
CCGAGAACGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGA	7	0.17500000000000002	No Hit
AATCATTGCAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTT	7	0.17500000000000002	No Hit
CCGTGAGATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCCGCCCCTCAAT	7	0.17500000000000002	No Hit
CGAGAACGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAA	6	0.15	No Hit
AAGCAGTGGTATCAACGCAGAGTACTGTTTTTTTTTTTTTTTTTTTTTTT	6	0.15	No Hit
TCTCGAGCCGCGCTTCTCACCGTCCCTGTTACCACCCGCAGCCATCTTCT	6	0.15	No Hit
GAACGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAAGCG	6	0.15	No Hit
CTCACACATCTCCCGAAACACGGACTCCTGGGTGGCAGCTTGCTCTGAGG	6	0.15	No Hit
TACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACCGTGAGATTCAGTTGTA	6	0.15	No Hit
CTGTTACCACCCGCAGCCATCTTCTTAAAGCCCCATGTACTCTGCGTTGA	6	0.15	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTAA	6	0.15	No Hit
GTGAAAACGCCTCTTCAGCAGCCCGGAAGCCTGCCGCAAGGGTCCCCGCA	6	0.15	No Hit
AATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACCGTGAGATTCAGTTG	6	0.15	No Hit
CTGCAGTGGAGGTGATTCCTGCAGGAGCCTCCTACAACCCAACCTTTGAA	6	0.15	No Hit
ATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACCGTGAGATTCAGTTGT	6	0.15	No Hit
ATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGGAGCCTC	5	0.125	No Hit
CTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGG	5	0.125	No Hit
GTCTGGGTTCCAGAGGTCATAGAAGGGTCGCTCAATGATGTCCTGGGGCC	5	0.125	No Hit
CCTGGCTGACCCTGCCAAGTTTCCTGAAGCAAGACTTGAACTCGCCATGA	5	0.125	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGGAGTAGAG	5	0.125	No Hit
CTACAGTATCTCATTGATTTAGGTCGAGTTGATCCAACTCAACCTATTGA	5	0.125	No Hit
TTCAAGAGAAAAGAACCAAGAAAGAAGAGGACCTTGGTCCAGAAGAAGTC	5	0.125	No Hit
GATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCCGCCCCTCAATAAAGTT	5	0.125	No Hit
CTCTTCTTTCTTGGTTCTTTTCTCTTGAATCCTGTGTCCACGAAGAAGAG	5	0.125	No Hit
GTAGAAGGCAGTTCAGGAGCTGTAATACTTGAGAAGATTCTCATCTGTAG	5	0.125	No Hit
CTTCAAAGGTTGGGTTGTAGGAGGCTCCTGCAGGAATCACCTCCACTGCA	5	0.125	No Hit
CAAGAAGAAAGGCGTGAGGCGGCCACAACGCCTCCACATCAAGCCTTCCC	5	0.125	No Hit
CGGAGCCCCGCCCCTCAATAAAGTTCTGTGACCAAAAAAAAAAAAAAAAA	5	0.125	No Hit
AGCGGGCCTACCGTGAGATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCC	5	0.125	No Hit
CTTTCGCCTGAGCTTCTTGGCATTAGGGACCTGATGTGCGAGGATGTCTT	5	0.125	No Hit
CTTCAGCAGCCCGGAAGCCTGCCGCAAGGGTCCCCGCACCAGACCAGCCA	5	0.125	No Hit
CCAAACGAAAAGCTCTTCTTCGTGGACACAGGATTCAAGAGAAAAGAACC	5	0.125	No Hit
CTTCAATATTAATTTTTGCTTGAAAAGTATCAGCACCCTCTTCAACCAGC	5	0.125	No Hit
CAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5	0.125	No Hit
CTCGAAGCAGGGCCTGGTGATCTTCAAAGGTTGGGTTGTAGGAGGCTCCT	5	0.125	No Hit
ATATGATTGAGCCCCGAGAACGAGCCAAGTTCAAGCGCAAATACAAAGTG	5	0.125	No Hit
>>END_MODULE
>>Adapter Content	fail
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10-11	0.0	0.0	0.0	0.0	0.0
12-13	0.0	0.0	0.0	0.0	0.0
14-15	0.0	0.0	0.0	0.0	0.0
16-17	0.0	0.0	0.0	0.0	0.0
18-19	0.0	0.0	0.0	0.0	0.0
20-21	0.0	0.0	0.0	0.0	0.0
22-23	0.0	0.0	0.0	0.0	0.0
24-25	0.0	0.0	0.0	0.0	0.0
26-27	0.025	0.0	0.0	0.0	0.0
28-29	0.07500000000000001	0.0	0.0	0.0	0.0
30-31	0.175	0.0	0.0	0.0	0.0
32-33	0.38749999999999996	0.0	0.0	0.0	0.0
34-35	0.5625	0.0	0.0	0.0	0.0
36-37	0.7875000000000001	0.0	0.0	0.0	0.0
38-39	0.975	0.0	0.0	0.0	0.0
40-41	1.2999999999999998	0.0	0.0	0.0	0.0
42-43	1.625	0.0	0.0	0.0	0.0
44-45	2.1	0.0	0.0	0.0	0.0
46-47	2.5625	0.0	0.0	0.0	0.0
48-49	3.0	0.0	0.0	0.0	0.0
50-51	3.45	0.0	0.0	0.0	0.0
52-53	4.125	0.0	0.0	0.0	0.0
54-55	5.1375	0.0	0.0	0.0	0.0
56-57	6.1	0.0	0.0	0.0	0.0
58-59	7.0875	0.0	0.0	0.0	0.0
60-61	8.2875	0.0	0.0	0.0	0.0
62-63	9.7125	0.0	0.0	0.0	0.0
64-65	11.2625	0.0	0.0	0.0	0.0
66-67	12.65	0.0	0.0	0.0	0.0
68-69	14.024999999999999	0.0	0.0	0.0	0.0
70-71	15.2125	0.0	0.0	0.0	0.0
72-73	16.5625	0.0	0.0	0.0	0.0
74-75	18.05	0.0	0.0	0.0	0.0
76-77	19.487499999999997	0.0	0.0	0.0	0.0
78-79	20.875	0.0	0.0	0.0	0.0
80-81	22.1875	0.0	0.0	0.0	0.0
82-83	23.625	0.0	0.0	0.0	0.0
84-85	25.137500000000003	0.0	0.0	0.0	0.0
86-87	26.575	0.0	0.0	0.0	0.0
88-89	28.125	0.0	0.0	0.0	0.0
90-91	29.375	0.0	0.0	0.0	0.0
92-93	30.5875	0.0	0.0	0.0	0.0
94-95	32.05	0.0	0.0	0.0	0.0
96-97	33.474999999999994	0.0	0.0	0.0	0.0
98-99	35.05	0.0	0.0	0.0	0.0
100-101	35.8875	0.0	0.0	0.0	0.0
102-103	36.475	0.0	0.0	0.0	0.0
104-105	37.2	0.0	0.0	0.0	0.0
106-107	37.875	0.0	0.0	0.0	0.0
108-109	38.4875	0.0	0.0	0.0	0.0
110-111	39.2375	0.0	0.0	0.0	0.0
112-113	39.8375	0.0	0.0	0.0	0.0
114-115	40.475	0.0	0.0	0.0	0.0
116-117	41.0875	0.0	0.0	0.0	0.0
118-119	41.7	0.0	0.0	0.0	0.0
120-121	42.35	0.0	0.0	0.0	0.0
122-123	43.025000000000006	0.0	0.0	0.0	0.0
124-125	43.6375	0.0	0.0	0.0	0.0
126-127	44.1875	0.0	0.0	0.0	0.0
128-129	44.7625	0.0	0.0	0.0	0.0
130-131	45.425	0.0	0.0	0.0	0.0
132-133	45.7625	0.0	0.0	0.0	0.0
134-135	46.287499999999994	0.0	0.0	0.0	0.0
136-137	46.725	0.0	0.0	0.0	0.0
138	47.15	0.0	0.0	0.0	0.0
>>END_MODULE
>>Kmer Content	fail
#Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTAATC	55	0.0	144.0	1
CTAATCA	55	0.0	144.0	2
CATTGCA	65	0.0	132.92307	7
AATCATT	65	0.0	132.92307	4
TAATCAT	65	0.0	132.92307	3
ATCATTG	65	0.0	132.92307	5
TCATTGC	65	0.0	132.92307	6
TTGCAAG	70	0.0	123.428566	9
ATTGCAA	70	0.0	123.428566	8
AAGCAGT	90	5.456968E-12	32.0	1
TGGTATC	100	2.1827873E-11	28.8	7
ACATGGG	25	5.183459E-4	28.8	35-39
AGTGGTA	100	2.1827873E-11	28.8	5
GTACATG	25	5.183459E-4	28.8	30-34
GTATCAA	100	4.8567017E-10	28.8	9
AGTACAT	25	5.183459E-4	28.8	30-34
GAGTACA	30	4.3922482E-5	28.8	30-34
CATGGGG	25	5.183459E-4	28.8	35-39
GTGGTAT	100	2.1827873E-11	28.8	6
CAGTGGT	100	4.8567017E-10	28.8	4
>>END_MODULE
SRR14016361 read2 length is 150 nt
##FastQC	0.11.5
>>Basic Statistics	pass
#Measure	Value
Filename	SRR14016361_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4000
Sequences flagged as poor quality	0
Sequence length	150
%GC	44
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	33.95075	37.0	37.0	37.0	25.0	37.0
2	33.9555	37.0	37.0	37.0	25.0	37.0
3	34.141	37.0	37.0	37.0	25.0	37.0
4	34.5615	37.0	37.0	37.0	25.0	37.0
5	34.8325	37.0	37.0	37.0	25.0	37.0
6	34.7095	37.0	37.0	37.0	25.0	37.0
7	34.55275	37.0	37.0	37.0	25.0	37.0
8	34.701	37.0	37.0	37.0	25.0	37.0
9	34.6545	37.0	37.0	37.0	25.0	37.0
10-14	34.83675	37.0	37.0	37.0	25.0	37.0
15-19	34.7553	37.0	37.0	37.0	25.0	37.0
20-24	34.740700000000004	37.0	37.0	37.0	25.0	37.0
25-29	34.6792	37.0	37.0	37.0	25.0	37.0
30-34	34.5294	37.0	37.0	37.0	25.0	37.0
35-39	34.161300000000004	37.0	37.0	37.0	25.0	37.0
40-44	34.2014	37.0	37.0	37.0	25.0	37.0
45-49	33.959199999999996	37.0	37.0	37.0	25.0	37.0
50-54	33.6507	37.0	37.0	37.0	22.2	37.0
55-59	32.9975	37.0	37.0	37.0	11.0	37.0
60-64	32.7947	37.0	37.0	37.0	11.0	37.0
65-69	32.2226	37.0	37.0	37.0	11.0	37.0
70-74	31.602300000000003	37.0	27.4	37.0	11.0	37.0
75-79	31.6213	37.0	25.0	37.0	11.0	37.0
80-84	31.3604	37.0	25.0	37.0	11.0	37.0
85-89	31.294400000000003	37.0	25.0	37.0	11.0	37.0
90-94	31.037950000000002	37.0	25.0	37.0	11.0	37.0
95-99	30.72015	37.0	25.0	37.0	11.0	37.0
100-104	30.5206	37.0	25.0	37.0	11.0	37.0
105-109	30.2137	37.0	25.0	37.0	11.0	37.0
110-114	30.123400000000004	37.0	25.0	37.0	11.0	37.0
115-119	29.727000000000004	37.0	25.0	37.0	11.0	37.0
120-124	29.7435	37.0	25.0	37.0	11.0	37.0
125-129	29.497500000000002	37.0	25.0	37.0	11.0	37.0
130-134	29.23215	37.0	22.2	37.0	11.0	37.0
135-139	29.342899999999997	37.0	25.0	37.0	11.0	37.0
140-144	29.084699999999998	37.0	22.2	37.0	11.0	37.0
145-149	29.1231	37.0	22.2	37.0	11.0	37.0
150	28.8625	37.0	11.0	37.0	11.0	37.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
12	1.0
13	0.0
14	1.0
15	0.0
16	0.0
17	2.0
18	5.0
19	3.0
20	23.0
21	33.0
22	86.0
23	127.0
24	157.0
25	210.0
26	213.0
27	171.0
28	142.0
29	105.0
30	127.0
31	132.0
32	151.0
33	248.0
34	403.0
35	768.0
36	874.0
37	18.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	26.870152614460846	23.91793845384038	14.060545409056793	35.15136352264198
2	14.932466233116559	24.512256128064035	35.4927463731866	25.062531265632813
3	20.935467733866933	23.28664332166083	32.491245622811405	23.28664332166083
4	19.225	35.199999999999996	21.125	24.45
5	19.400000000000002	42.325	19.85	18.425
6	24.125	28.875	26.900000000000002	20.1
7	20.005001250312578	25.131282820705174	28.207051762940733	26.65666416604151
8	22.725	31.874999999999996	23.125	22.275
9	22.961480740370185	23.836918459229615	32.566283141570786	20.635317658829415
10-14	21.416070803540176	29.956497824891244	24.8062403120156	23.821191059552977
15-19	24.237423742374236	27.512751275127513	24.107410741074105	24.14241424142414
20-24	23.66	28.585	27.68	20.075000000000003
25-29	20.929185837167434	28.93078615723145	27.070414082816562	23.06961392278456
30-34	22.877287728772878	27.4977497749775	29.042904290429046	20.582058205820584
35-39	19.251925192519252	27.487748774877485	32.57825782578258	20.68206820682068
40-44	21.539307861572315	26.17023404680936	32.77655531106221	19.513902780556112
45-49	20.161048314494348	27.323196959087724	33.815144543363004	18.700610183054916
50-54	21.139227845569113	27.790558111622328	32.65153030606121	18.418683736747347
55-59	22.676803040912276	27.45823747124137	31.31439431829549	18.550565169550865
60-64	22.974594918983797	29.68593718743749	29.055811162232448	18.28365673134627
65-69	24.74742422726818	30.069020706211862	27.438231469440833	17.745323597079125
70-74	25.81516303260652	30.966193238647726	25.675135027005403	17.543508701740347
75-79	27.142714271427142	30.673067306730672	24.607460746074608	17.576757675767578
80-84	28.005000000000003	30.875000000000004	24.740000000000002	16.38
85-89	28.720744148829763	31.421284256851372	23.424684936987397	16.433286657331468
90-94	28.81220305076269	31.30782695673918	23.50587646911728	16.374093523380846
95-99	29.072268067016754	32.223055763940984	23.15578894723681	15.548887221805451
100-104	28.885777155431086	32.22644528905781	23.074614922984598	15.813162632526506
105-109	29.473842152645798	32.06962088626588	23.582074622386717	14.87446233870161
110-114	29.375	32.415	23.395	14.815000000000001
115-119	30.88117623524705	33.086617323464694	22.639527905581115	13.392678535707143
120-124	31.918191819181917	33.76837683768377	21.342134213421343	12.971297129712973
125-129	34.32843284328433	32.58825882588259	20.73207320732073	12.351235123512351
130-134	36.421821091054554	31.13155657782889	20.10600530026501	12.340617030851543
135-139	40.054005400540056	29.737973797379734	18.286828682868286	11.92119211921192
140-144	42.52425242524252	29.067906790679064	17.466746674667466	10.94109410941094
145-149	45.4036210863259	28.64359307792338	15.93478043413024	10.018005401620487
150	47.725	27.425	15.75	9.1
>>END_MODULE
>>Per sequence GC content	fail
#GC Content	Count
0	1.0
1	1.5
2	2.0
3	1.5
4	1.0
5	1.0
6	2.0
7	3.5
8	3.5
9	5.0
10	4.5
11	6.0
12	12.5
13	16.5
14	22.5
15	26.5
16	21.5
17	21.0
18	32.0
19	39.0
20	41.0
21	36.0
22	35.5
23	43.0
24	45.5
25	47.0
26	49.0
27	46.5
28	38.5
29	44.0
30	50.5
31	47.0
32	53.5
33	61.5
34	61.5
35	60.0
36	60.5
37	60.0
38	61.0
39	76.0
40	84.0
41	87.5
42	84.5
43	93.0
44	111.0
45	113.0
46	137.5
47	161.0
48	142.0
49	135.0
50	165.5
51	161.0
52	166.5
53	198.0
54	167.5
55	112.5
56	93.0
57	99.5
58	98.5
59	86.5
60	75.0
61	52.0
62	30.5
63	20.5
64	23.0
65	22.5
66	10.5
67	6.5
68	6.0
69	3.5
70	1.5
71	0.5
72	0.5
73	0.5
74	0.5
75	1.0
76	1.0
77	0.5
78	0.0
79	0.0
80	0.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.5
96	1.0
97	0.5
98	0.0
99	0.5
100	2.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.075
2	0.05
3	0.05
4	0.0
5	0.0
6	0.0
7	0.025
8	0.0
9	0.05
10-14	0.005
15-19	0.01
20-24	0.0
25-29	0.02
30-34	0.01
35-39	0.01
40-44	0.02
45-49	0.03
50-54	0.02
55-59	0.03
60-64	0.02
65-69	0.03
70-74	0.02
75-79	0.01
80-84	0.0
85-89	0.02
90-94	0.025
95-99	0.025
100-104	0.02
105-109	0.03
110-114	0.0
115-119	0.02
120-124	0.01
125-129	0.01
130-134	0.005
135-139	0.01
140-144	0.01
145-149	0.03
150	0.0
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
150	4000.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Deduplicated Percentage	69.425
#Duplication Level	Percentage of deduplicated	Percentage of total
1	82.78718041051495	57.475
2	10.406913935902052	14.45
3	3.0248469571480014	6.3
4	1.7284839755131436	4.8
5	0.7202016564638098	2.5
6	0.5761613251710479	2.4
7	0.18005041411595246	0.8750000000000001
8	0.10803024846957147	0.6
9	0.21606049693914295	1.35
>10	0.18005041411595246	2.075
>50	0.0	0.0
>100	0.07202016564638099	7.175
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTT	164	4.1000000000000005	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	123	3.075	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGGCTTTAAG	35	0.8750000000000001	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	18	0.44999999999999996	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	10	0.25	No Hit
CAAATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACCGTGAGATTCAGT	10	0.25	No Hit
CCGTGAGATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCCGCCCCTCAAT	10	0.25	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGGAGAGGAC	9	0.22499999999999998	No Hit
CGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAAGCGGGC	9	0.22499999999999998	No Hit
TAATCATTGCAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTT	9	0.22499999999999998	No Hit
CTGTTACCACCCGCAGCCATCTTCTTAAAGCCCCATGTACTCTGCGTTGA	9	0.22499999999999998	No Hit
CTCGAGCCGCGCTTCTCACCGTCCCTGTTACCACCCGCAGCCATCTTCTT	9	0.22499999999999998	No Hit
CTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTT	9	0.22499999999999998	No Hit
CTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGG	8	0.2	No Hit
CTTGAACTCGCCATGAAGTTTGGCTACGTCCTTCCTGATATTACGAAAGA	8	0.2	No Hit
CCGAGAACGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGA	8	0.2	No Hit
TGATTGAGCCCCGAGAACGAGCCAAGTTCAAGCGCAAATACAAAGTGAAG	7	0.17500000000000002	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGCTTTAAGA	7	0.17500000000000002	No Hit
CTCCCACACCAAAGGCCAAACCTGGGCCCCAGGACATCATTGAGCGACCC	7	0.17500000000000002	No Hit
CTCGAAGCAGGGCCTGGTGATCTTCAAAGGTTGGGTTGTAGGAGGCTCCT	7	0.17500000000000002	No Hit
ATATGATTGAGCCCCGAGAACGAGCCAAGTTCAAGCGCAAATACAAAGTG	7	0.17500000000000002	No Hit
CTTTGATTGGTCAGGATGCATTTTTTCTGGAACAGACCAAGAAGAAAGGC	6	0.15	No Hit
CAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACC	6	0.15	No Hit
ATTTTTTCTGGAACAGACCAAGAAGAAAGGCGTGAGGCGGCCACAACGCC	6	0.15	No Hit
GTTCATCTTTCGTAATATCAGGAAGGACGTAGCCAAACTTCATGGCGAGT	6	0.15	No Hit
CTACCGTGAGATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCCGCCCCTC	6	0.15	No Hit
ATCATTCTAAGATCCCTGCTCCCAAAGACATCCTCGCACATCAGGTCCCT	6	0.15	No Hit
CTCACCGTCCCTGTTACCACCCGCAGCCATCTTCTTAAAGCCCCATGTAC	6	0.15	No Hit
ATTGCAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT	6	0.15	No Hit
CTTCAAAGGTTGGGTTGTAGGAGGCTCCTGCAGGAATCACCTCCACTGCA	6	0.15	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGGCCTTTAA	6	0.15	No Hit
CCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTAC	6	0.15	No Hit
GTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACCGTG	6	0.15	No Hit
CTTTTCAAGCAAAAATTAATATTGAAGTGCAGCTGGCTTCAGAATTAGCC	6	0.15	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6	0.15	No Hit
GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGGCTTTTAA	6	0.15	No Hit
CTTCAATATTAATTTTTGCTTGAAAAGTATCAGCACCCTCTTCAACCAGC	6	0.15	No Hit
CGCAAATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACCGTGAGATTCA	5	0.125	No Hit
CTAGAAATTCTGTGCAAGCCTATTCCATTCTTTCTGCGGGGACAACCAAT	5	0.125	No Hit
ACAGGCCCGACTCCTTAGCCCTCCCACACCAAAGGCCAAACCTGGGCCCC	5	0.125	No Hit
TCCCACACCAAAGGCCAAACCTGGGCCCCAGGACATCATTGAGCGACCCT	5	0.125	No Hit
ATTTGTTTGAAATTGTATTGAAACAATTTAATGAAAACATTAAATACTTG	5	0.125	No Hit
ATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCCGCCCCTCAATAAAGTTC	5	0.125	No Hit
CTCTTCAGCAGCCCGGAAGCCTGCCGCAAGGGTCCCCGCACCAGACCAGC	5	0.125	No Hit
GGCCTACCGTGAGATTCAGTTGTAGCTGTGCAGATGTCGGAGCCCCGCCC	5	0.125	No Hit
CAGAACTTTATTGAGGGGCGGGGCTCCGACATCTGCACAGCTACAACTGA	5	0.125	No Hit
CTGGAGCGACAGCTGGCCCTGCCCACCTCAGAGCAAGCTGCCACCCAGGA	5	0.125	No Hit
CCCCGAGAACGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGA	5	0.125	No Hit
GGTTGTAGGAGGCTCCTGCAGGAATCACCTCCACTGCAGGCACCTGGGAA	5	0.125	No Hit
CTACAGCCTTCTATGACCCAAGAAGTCTAGAAATTCTGTGCAAGCCTATT	5	0.125	No Hit
GATGTCGGAGCCCCGCCCCTCAATAAAGTTCTGTGACCAAAAAAAAAAAA	5	0.125	No Hit
TTCAAGAGCTTCCAGAAGAGAAATATGATTGAGCCCCGAGAACGAGCCAA	5	0.125	No Hit
GTGGAGAAGCGGGCCTACCGTGAGATTCAGTTGTAGCTGTGCAGATGTCG	5	0.125	No Hit
CTGATGTGCGAGGATGTCTTTGGGAGCAGGGATCTTAGAATGATTCTCAA	5	0.125	No Hit
ACTCAGGACACTGAAGCCAGAAGGTCACATTCTCCGAGACAGGTTCAAGA	5	0.125	No Hit
AGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAAGCGGGCCTACCGT	5	0.125	No Hit
ATCAACGCAGAGTACATGGGGCTTTAAGAAGATGGCTGCGGGTGGTAACA	5	0.125	No Hit
>>END_MODULE
>>Adapter Content	fail
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10-11	0.0	0.0	0.0	0.0	0.0
12-13	0.0	0.0	0.0	0.0	0.0
14-15	0.0	0.0	0.0	0.0	0.0
16-17	0.0	0.0	0.0	0.0	0.0
18-19	0.0	0.0	0.0	0.0	0.0
20-21	0.0	0.0	0.0	0.0	0.0
22-23	0.0	0.0	0.0	0.0	0.0
24-25	0.0	0.0	0.0	0.0	0.0
26-27	0.025	0.0	0.0	0.0	0.0
28-29	0.07500000000000001	0.0	0.0	0.0	0.0
30-31	0.175	0.0	0.0	0.0	0.0
32-33	0.38749999999999996	0.0	0.0	0.0	0.0
34-35	0.575	0.0	0.0	0.0	0.0
36-37	0.8125	0.0	0.0	0.0	0.0
38-39	0.975	0.0	0.0	0.0	0.0
40-41	1.2875	0.0	0.0	0.0	0.0
42-43	1.6125	0.0	0.0	0.0	0.0
44-45	2.1	0.0	0.0	0.0	0.0
46-47	2.5375	0.0	0.0	0.0	0.0
48-49	3.0	0.0	0.0	0.0	0.0
50-51	3.4375	0.0	0.0	0.0	0.0
52-53	4.025	0.0	0.0	0.0	0.0
54-55	4.9875	0.0	0.0	0.0	0.0
56-57	5.9625	0.0	0.0	0.0	0.0
58-59	6.9625	0.0	0.0	0.0	0.0
60-61	8.2375	0.0	0.0	0.0	0.0
62-63	9.625	0.0	0.0	0.0	0.0
64-65	11.125	0.0	0.0	0.0	0.0
66-67	12.525	0.0	0.0	0.0	0.0
68-69	13.925	0.0	0.0	0.0	0.0
70-71	15.1375	0.0	0.0	0.0	0.0
72-73	16.450000000000003	0.0	0.0	0.0	0.0
74-75	18.025	0.0	0.0	0.0	0.0
76-77	19.45	0.0	0.0	0.0	0.0
78-79	20.762500000000003	0.0	0.0	0.0	0.0
80-81	22.025	0.0	0.0	0.0	0.0
82-83	23.475	0.0	0.0	0.0	0.0
84-85	25.012500000000003	0.0	0.0	0.0	0.0
86-87	26.4375	0.0	0.0	0.0	0.0
88-89	27.9	0.0	0.0	0.0	0.0
90-91	29.125	0.0	0.0	0.0	0.0
92-93	30.362499999999997	0.0	0.0	0.0	0.0
94-95	31.862499999999997	0.0	0.0	0.0	0.0
96-97	33.2625	0.0	0.0	0.0	0.0
98-99	34.8125	0.0	0.0	0.0	0.0
100-101	35.6125	0.0	0.0	0.0	0.0
102-103	36.1625	0.0	0.0	0.0	0.0
104-105	36.8375	0.0	0.0	0.0	0.0
106-107	37.462500000000006	0.0	0.0	0.0	0.0
108-109	38.05	0.0	0.0	0.0	0.0
110-111	38.787499999999994	0.0	0.0	0.0	0.0
112-113	39.375	0.0	0.0	0.0	0.0
114-115	39.9875	0.0	0.0	0.0	0.0
116-117	40.525	0.0	0.0	0.0	0.0
118-119	41.1375	0.0	0.0	0.0	0.0
120-121	41.7	0.0	0.0	0.0	0.0
122-123	42.349999999999994	0.0	0.0	0.0	0.0
124-125	42.9875	0.0	0.0	0.0	0.0
126-127	43.525000000000006	0.0	0.0	0.0	0.0
128-129	44.075	0.0	0.0	0.0	0.0
130-131	44.775	0.0	0.0	0.0	0.0
132-133	45.125	0.0	0.0	0.0	0.0
134-135	45.6875	0.0	0.0	0.0	0.0
136-137	46.1125	0.0	0.0	0.0	0.0
138	46.55	0.0	0.0	0.0	0.0
>>END_MODULE
>>Kmer Content	fail
#Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTAATC	25	3.201967E-8	144.0	1
CTAATCA	25	3.201967E-8	144.0	2
AATCATT	30	9.508585E-8	120.0	4
TAATCAT	30	9.508585E-8	120.0	3
TTGCAAG	35	2.3845314E-7	102.85714	9
CATTGCA	35	2.3845314E-7	102.85714	7
ATTGCAA	35	2.3845314E-7	102.85714	8
TCATTGC	35	2.3845314E-7	102.85714	6
ATCATTG	40	5.2840005E-7	90.0	5
TGGTATC	50	5.915723E-5	43.199997	7
AGTGGTA	50	0.0013929702	43.199997	5
GTGGTAT	50	0.0013929702	43.199997	6
AGCAGTG	55	1.2304276E-4	39.272728	2
AAGCAGT	60	0.0047032754	36.0	1
CAAGCAG	35	1.2542517E-4	24.685713	10-14
TGCAAGC	40	3.1003024E-4	21.599998	10-14
GCAAGCA	35	0.0036813593	20.571428	7
TCAACGC	50	5.915723E-5	20.16	20-24
GCAGAGT	50	5.915723E-5	20.16	25-29
GTACTTT	40	0.007966741	18.0	30-34
>>END_MODULE
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:03:28 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:39 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:03:41 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:47 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:48 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:48 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:49 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:50 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:51 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:52 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:52 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:53 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:54 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:54 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:55 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:55 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:55 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:55 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:56 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:57 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:03:58 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:03:58 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:00 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:01 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:01 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:02 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:04 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:04 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:05 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:05 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:05 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:06 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:06 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:06 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:07 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:07 fastq-dump.3.0.1 warn: database incorrect while opening manager within database module - can't open NC_000071.6 as a RefSeq or as a WGS
2023-05-11T13:04:07 fastq-dump.3.0.1 err: database incorrect while opening manager within database module - failed SRR14016361.sra
2023-05-11T13:04:07 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:08 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:08 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:08 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:08 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:09 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:09 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:09 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:10 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:10 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:10 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:11 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:11 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:11 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:11 fastq-dump.3.0.1 warn: database incorrect while opening manager within database module - can't open NC_000068.7 as a RefSeq or as a WGS
2023-05-11T13:04:11 fastq-dump.3.0.1 err: database incorrect while opening manager within database module - failed SRR14016361.sra
2023-05-11T13:04:11 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:12 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:12 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:12 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:12 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:13 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:13 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:13 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:14 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:15 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:17 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:17 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:17 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:17 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:18 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:18 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:18 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:18 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:18 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:19 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:19 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:19 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:19 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:19 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:19 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:19 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:19 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:20 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:20 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:21 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:21 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:22 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:22 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:22 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:22 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:22 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:22 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:23 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:24 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:24 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:24 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:24 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:24 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:24 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:24 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:24 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:25 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:25 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:25 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:26 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:26 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:26 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:26 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:26 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:26 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:27 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:27 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:27 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:27 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:28 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:28 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:28 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:28 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:28 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:28 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:29 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:29 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:29 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:29 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:29 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:29 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:29 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:30 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:30 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:30 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:30 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:30 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:30 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:30 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:30 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:31 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:32 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:32 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:32 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:32 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:32 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:33 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:33 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:33 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:33 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:33 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file

=============================================================
An error occurred during processing.
A report was generated into the file '/root/ncbi_error_report.txt'.
If the problem persists, you may consider sending the file
to 'sra-tools@ncbi.nlm.nih.gov' for assistance.
=============================================================

fastq-dump quit with error code 3
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:34 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:35 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:35 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:35 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:35 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:35 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:35 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:36 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:36 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:36 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:36 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:36 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:36 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:36 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:36 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:37 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:38 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:38 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:38 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:38 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:38 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:38 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:39 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file

=============================================================
An error occurred during processing.
A report was generated into the file '/root/ncbi_error_report.txt'.
If the problem persists, you may consider sending the file
to 'sra-tools@ncbi.nlm.nih.gov' for assistance.
=============================================================

fastq-dump quit with error code 3
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:39 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:39 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
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Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:39 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:39 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
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Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:40 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:41 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:41 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:41 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:41 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:42 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:42 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:42 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
SRR ids: ['SRR14016361.sra']
extra args: ['--split-files', '--defline-qual', '+']
tempdir: /tmp/pfd_d4brbsjj
SRR14016361.sra spots: 29622567
blocks: [[1, 462852], [462853, 925704], [925705, 1388556], [1388557, 1851408], [1851409, 2314260], [2314261, 2777112], [2777113, 3239964], [3239965, 3702816], [3702817, 4165668], [4165669, 4628520], [4628521, 5091372], [5091373, 5554224], [5554225, 6017076], [6017077, 6479928], [6479929, 6942780], [6942781, 7405632], [7405633, 7868484], [7868485, 8331336], [8331337, 8794188], [8794189, 9257040], [9257041, 9719892], [9719893, 10182744], [10182745, 10645596], [10645597, 11108448], [11108449, 11571300], [11571301, 12034152], [12034153, 12497004], [12497005, 12959856], [12959857, 13422708], [13422709, 13885560], [13885561, 14348412], [14348413, 14811264], [14811265, 15274116], [15274117, 15736968], [15736969, 16199820], [16199821, 16662672], [16662673, 17125524], [17125525, 17588376], [17588377, 18051228], [18051229, 18514080], [18514081, 18976932], [18976933, 19439784], [19439785, 19902636], [19902637, 20365488], [20365489, 20828340], [20828341, 21291192], [21291193, 21754044], [21754045, 22216896], [22216897, 22679748], [22679749, 23142600], [23142601, 23605452], [23605453, 24068304], [24068305, 24531156], [24531157, 24994008], [24994009, 25456860], [25456861, 25919712], [25919713, 26382564], [26382565, 26845416], [26845417, 27308268], [27308269, 27771120], [27771121, 28233972], [28233973, 28696824], [28696825, 29159676], [29159677, 29622567]]
fastq-dump error! exit code: 3
2023-05-11T13:04:42 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:42 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:44 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:44 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:44 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:45 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
SRR14016361 file size 775284
SRR14016361 completed basic pipeline successfully
2023-05-11T13:04:45 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
2023-05-11T13:04:46 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
skewer v0.2.2 [April 4, 2016]
COMMAND LINE:	skewer -f sanger -l 18 -q 10 -k inf -t 64 -o SRR14016361 SRR14016361_1.fastq SRR14016361_2.fastq
Input file:	SRR14016361_1.fastq
Paired file:	SRR14016361_2.fastq
trimmed:	SRR14016361-trimmed-pair1.fastq, SRR14016361-trimmed-pair2.fastq

Parameters used:
-- 3' end adapter sequence (-x):	AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC
-- paired 3' end adapter sequence (-y):	AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTA
-- maximum error ratio allowed (-r):	0.100
-- maximum indel error ratio allowed (-d):	0.030
-- end quality threshold (-q):		10
-- minimum read length allowed after trimming (-l):	18
-- file format (-f):		Sanger/Illumina 1.8+ FASTQ 
-- number of concurrent threads (-t):	32
Thu May 11 13:04:45 2023 >> started

Thu May 11 13:04:50 2023 >> done (4.826s)
2314260 read pairs processed; of these:
     36 ( 0.00%) short read pairs filtered out after trimming by size control
    347 ( 0.01%) empty read pairs filtered out after trimming by size control
2313877 (99.98%) read pairs available; of these:
1002955 (43.35%) trimmed read pairs available after processing
1310922 (56.65%) untrimmed read pairs available after processing

Length distribution of reads after trimming:
length	count	percentage
 20	      2	  0.00%
 21	      3	  0.00%
 22	     10	  0.00%
 23	     29	  0.00%
 24	     32	  0.00%
 25	     72	  0.00%
 26	     44	  0.00%
 27	    203	  0.01%
 28	    332	  0.01%
 29	    486	  0.02%
 30	    747	  0.03%
 31	   1179	  0.05%
 32	   1391	  0.06%
 33	   1461	  0.06%
 34	   1698	  0.07%
 35	   1888	  0.08%
 36	   2061	  0.09%
 37	   2113	  0.09%
 38	   2517	  0.11%
 39	   3134	  0.14%
 40	   3958	  0.17%
 41	   5414	  0.23%
 42	   7263	  0.31%
 43	   6030	  0.26%
 44	   5891	  0.25%
 45	   5213	  0.23%
 46	   5006	  0.22%
 47	   5447	  0.24%
 48	   5531	  0.24%
 49	   6982	  0.30%
 50	   6924	  0.30%
 51	   7813	  0.34%
 52	   8967	  0.39%
 53	   9310	  0.40%
 54	   9553	  0.41%
 55	   9850	  0.43%
 56	   9759	  0.42%
 57	   9935	  0.43%
 58	  10178	  0.44%
 59	  10525	  0.45%
 60	  10443	  0.45%
 61	  10046	  0.43%
 62	  10455	  0.45%
 63	  10663	  0.46%
 64	  10458	  0.45%
 65	  10957	  0.47%
 66	  10953	  0.47%
 67	  10978	  0.47%
 68	  10769	  0.47%
 69	  10679	  0.46%
 70	  10843	  0.47%
 71	  10829	  0.47%
 72	  11092	  0.48%
 73	  11071	  0.48%
 74	  10904	  0.47%
 75	  10984	  0.47%
 76	  11163	  0.48%
 77	  10766	  0.47%
 78	  10894	  0.47%
 79	  10767	  0.47%
 80	  10874	  0.47%
 81	  10661	  0.46%
 82	  10719	  0.46%
 83	  10635	  0.46%
 84	  10390	  0.45%
 85	  10569	  0.46%
 86	  10386	  0.45%
 87	  10460	  0.45%
 88	  10170	  0.44%
 89	  10416	  0.45%
 90	  10314	  0.45%
 91	  10075	  0.44%
 92	  10214	  0.44%
 93	  10113	  0.44%
 94	  10110	  0.44%
 95	   9927	  0.43%
 96	   9897	  0.43%
 97	  10033	  0.43%
 98	   9761	  0.42%
 99	   9422	  0.41%
100	   9713	  0.42%
101	   9390	  0.41%
102	   9226	  0.40%
103	   9459	  0.41%
104	   9191	  0.40%
105	   9240	  0.40%
106	   9466	  0.41%
107	   9085	  0.39%
108	   8944	  0.39%
109	   9070	  0.39%
110	   8858	  0.38%
111	   9152	  0.40%
112	   8901	  0.38%
113	   8828	  0.38%
114	   8886	  0.38%
115	   8765	  0.38%
116	   8651	  0.37%
117	   8515	  0.37%
118	   8530	  0.37%
119	   8589	  0.37%
120	   8356	  0.36%
121	   8506	  0.37%
122	   8395	  0.36%
123	   8388	  0.36%
124	   8419	  0.36%
125	   8110	  0.35%
126	   8124	  0.35%
127	   8015	  0.35%
128	   8207	  0.35%
129	   8017	  0.35%
130	   8070	  0.35%
131	   7959	  0.34%
132	   7828	  0.34%
133	   7862	  0.34%
134	   7590	  0.33%
135	   7759	  0.34%
136	   7603	  0.33%
137	   7707	  0.33%
138	   7478	  0.32%
139	   7459	  0.32%
140	   7350	  0.32%
141	   7401	  0.32%
142	   7381	  0.32%
143	   7330	  0.32%
144	   7257	  0.31%
145	   7201	  0.31%
146	   7241	  0.31%
147	   7238	  0.31%
148	   7151	  0.31%
149	   7283	  0.31%
150	1310922	 56.65%
2313877 reads passed initial QC
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra
2023-05-11T13:04:54 fastq-dump.3.0.1 sys: path not found while renaming directory within file system module - finalize_v3 - failed to rename the cache-file


criterion=sequence-density
sequence-density=4.60
sequence-density-rank=1
fanout-score=0.00
fanout-score-rank=39
prefix-density=0.00
prefix-fanout=1.0
sequence=GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGG


criterion=fanout-score
sequence-density=0.12
sequence-density-rank=34
fanout-score=30.45
fanout-score-rank=1
prefix-density=3.76
prefix-fanout=1.0
sequence=GTACATGGGGAT
Read 462852 spots for SRR14016361.sra
Written 462852 spots for SRR14016361.sra


criterion=sequence-density
sequence-density=4.30
sequence-density-rank=1
fanout-score=0.00
fanout-score-rank=41
prefix-density=0.00
prefix-fanout=1.0
sequence=GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGG


criterion=fanout-score
sequence-density=0.13
sequence-density-rank=29
fanout-score=64.45
fanout-score-rank=1
prefix-density=8.03
prefix-fanout=1.0
sequence=ACGCAGAGTACT
Potential 3prime adapter identified. Now checking if in reference sequence
/dee2/code/volunteer_pipeline.sh: line 818: -f: command not found
/dee2/code/volunteer_pipeline.sh: line 819: -f: command not found
Adapter seq not found in reference. Now shuffling file before clipping
Read 462891 spots for SRR14016361.sra
Written 462891 spots for SRR14016361.sra
skewer v0.2.2 [April 4, 2016]
COMMAND LINE:	skewer -f sanger -l 18 -t 64 -x GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGG -y GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGG -o SRR14016361 SRR14016361_1.fastq SRR14016361_2.fastq
Input file:	SRR14016361_1.fastq
Paired file:	SRR14016361_2.fastq
trimmed:	SRR14016361-trimmed-pair1.fastq, SRR14016361-trimmed-pair2.fastq

Parameters used:
-- 3' end adapter sequence (-x):	GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGG
-- paired 3' end adapter sequence (-y):	GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGG
-- maximum error ratio allowed (-r):	0.100
-- maximum indel error ratio allowed (-d):	0.030
-- minimum read length allowed after trimming (-l):	18
-- file format (-f):		Sanger/Illumina 1.8+ FASTQ 
-- number of concurrent threads (-t):	32
Thu May 11 13:05:20 2023 >> started

Thu May 11 13:05:23 2023 >> done (2.973s)
1388326 read pairs processed; of these:
     18 ( 0.00%) short read pairs filtered out after trimming by size control
  82545 ( 5.95%) empty read pairs filtered out after trimming by size control
1305763 (94.05%) read pairs available; of these:
     13 ( 0.00%) trimmed read pairs available after processing
1305750 (100.00%) untrimmed read pairs available after processing

Length distribution of reads after trimming:
length	count	percentage
 20	      1	  0.00%
 21	      0	  0.00%
 22	      4	  0.00%
 23	     16	  0.00%
 24	     19	  0.00%
 25	     35	  0.00%
 26	     29	  0.00%
 27	    119	  0.01%
 28	    189	  0.01%
 29	    297	  0.02%
 30	    450	  0.03%
 31	    716	  0.05%
 32	    773	  0.06%
 33	    861	  0.07%
 34	   1004	  0.08%
 35	   1076	  0.08%
 36	   1244	  0.10%
 37	   1282	  0.10%
 38	   1470	  0.11%
 39	   1855	  0.14%
 40	   2365	  0.18%
 41	   3179	  0.24%
 42	   3504	  0.27%
 43	   3573	  0.27%
 44	   3557	  0.27%
 45	   3126	  0.24%
 46	   2933	  0.22%
 47	   3271	  0.25%
 48	   3246	  0.25%
 49	   4007	  0.31%
 50	   4111	  0.31%
 51	   4595	  0.35%
 52	   5184	  0.40%
 53	   5443	  0.42%
 54	   5528	  0.42%
 55	   5819	  0.45%
 56	   5786	  0.44%
 57	   5822	  0.45%
 58	   5820	  0.45%
 59	   5921	  0.45%
 60	   5966	  0.46%
 61	   5779	  0.44%
 62	   6029	  0.46%
 63	   6267	  0.48%
 64	   5987	  0.46%
 65	   6215	  0.48%
 66	   6303	  0.48%
 67	   6321	  0.48%
 68	   6119	  0.47%
 69	   6253	  0.48%
 70	   6250	  0.48%
 71	   6209	  0.48%
 72	   6260	  0.48%
 73	   6419	  0.49%
 74	   6299	  0.48%
 75	   6209	  0.48%
 76	   6390	  0.49%
 77	   6315	  0.48%
 78	   6323	  0.48%
 79	   6170	  0.47%
 80	   6270	  0.48%
 81	   6119	  0.47%
 82	   6195	  0.47%
 83	   6031	  0.46%
 84	   5925	  0.45%
 85	   6044	  0.46%
 86	   5879	  0.45%
 87	   5989	  0.46%
 88	   5731	  0.44%
 89	   5917	  0.45%
 90	   5864	  0.45%
 91	   5739	  0.44%
 92	   5826	  0.45%
 93	   5764	  0.44%
 94	   5858	  0.45%
 95	   5488	  0.42%
 96	   5547	  0.42%
 97	   5725	  0.44%
 98	   5576	  0.43%
 99	   5332	  0.41%
100	   5747	  0.44%
101	   5338	  0.41%
102	   5205	  0.40%
103	   5405	  0.41%
104	   5300	  0.41%
105	   5202	  0.40%
106	   5339	  0.41%
107	   5193	  0.40%
108	   5120	  0.39%
109	   5230	  0.40%
110	   5011	  0.38%
111	   5247	  0.40%
112	   5029	  0.39%
113	   5071	  0.39%
114	   5066	  0.39%
115	   4868	  0.37%
116	   4951	  0.38%
117	   4827	  0.37%
118	   4742	  0.36%
119	   4784	  0.37%
120	   4629	  0.35%
121	   4763	  0.36%
122	   4781	  0.37%
123	   4803	  0.37%
124	   4775	  0.37%
125	   4490	  0.34%
126	   4563	  0.35%
127	   4518	  0.35%
128	   4659	  0.36%
129	   4415	  0.34%
130	   4541	  0.35%
131	   4419	  0.34%
132	   4478	  0.34%
133	   4553	  0.35%
134	   4339	  0.33%
135	   4384	  0.34%
136	   4226	  0.32%
137	   4329	  0.33%
138	   4190	  0.32%
139	   4274	  0.33%
140	   4154	  0.32%
141	   4041	  0.31%
142	   4192	  0.32%
143	   4187	  0.32%
144	   4170	  0.32%
145	   4141	  0.32%
146	   4024	  0.31%
147	   4049	  0.31%
148	   4079	  0.31%
149	   4034	  0.31%
150	 732756	 56.12%


criterion=sequence-density
sequence-density=2.81
sequence-density-rank=1
fanout-score=0.00
fanout-score-rank=40
prefix-density=0.00
prefix-fanout=1.0
sequence=GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGG


criterion=fanout-score
sequence-density=0.61
sequence-density-rank=2
fanout-score=26.02
fanout-score-rank=1
prefix-density=0.58
prefix-fanout=26.0
sequence=CCCCATGTACTCTGCGTTGATACCACTGCTTGCAATGATTAGCAGATCGGAAG


criterion=sequence-density
sequence-density=2.64
sequence-density-rank=1
fanout-score=0.00
fanout-score-rank=39
prefix-density=0.00
prefix-fanout=1.0
sequence=GCTAATCATTGCAAGCAGTGGTATCAACGCAGAGTACATGGGG


criterion=fanout-score
sequence-density=0.12
sequence-density-rank=12
fanout-score=51.71
fanout-score-rank=1
prefix-density=6.26
prefix-fanout=1.0
sequence=ACGCAGAGTACT
SRR14016361 testing PE reads STAR mapping to Ensembl genome
                                 Started job on |	May 11 13:07:06
                             Started mapping on |	May 11 13:07:06
                                    Finished on |	May 11 13:07:36
       Mapping speed, Million of reads per hour |	267.76

                          Number of input reads |	2231314
                      Average input read length |	249
                                    UNIQUE READS:
                   Uniquely mapped reads number |	1627304
                        Uniquely mapped reads % |	72.93%
                          Average mapped length |	244.14
                       Number of splices: Total |	1407740
            Number of splices: Annotated (sjdb) |	1389292
                       Number of splices: GT/AG |	1385497
                       Number of splices: GC/AG |	14732
                       Number of splices: AT/AC |	3371
               Number of splices: Non-canonical |	4140
                      Mismatch rate per base, % |	0.37%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.58
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.19
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	244391
             % of reads mapped to multiple loci |	10.95%
        Number of reads mapped to too many loci |	3559
             % of reads mapped to too many loci |	0.16%
                                  UNMAPPED READS:
       % of reads unmapped: too many mismatches |	0.00%
                 % of reads unmapped: too short |	15.90%
                     % of reads unmapped: other |	0.06%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%
N_unmapped	359619	359619	359619
N_multimapping	244391	244391	244391
N_noFeature	190440	886549	884139
N_ambiguous	77114	15736	15254
UnstrandedReadsAssigned:1359750 PositiveStrandReadsAssigned:725019 NegativeStrandReadsAssigned:727911
Dataset is classified unstranded
MeadianReadLen=150 20thPercentileLength=86 echo kmer=81
SRR14016361 Starting Kallisto paired end mapping to ensembl reference transcriptome

[quant] fragment length distribution will be estimated from the data
[index] k-mer length: 31
[index] number of targets: 109,282
[index] number of k-mers: 95,711,799
[index] number of equivalence classes: 391,900
[quant] running in paired-end mode
[quant] will process pair 1: SRR14016361-trimmed-pair1.fastq
                             SRR14016361-trimmed-pair2.fastq
[quant] finding pseudoalignments for the reads ... done
[quant] processed 2,231,314 reads, 1,694,463 reads pseudoaligned
[quant] estimated average fragment length: 167.094
[   em] quantifying the abundances ... done
[   em] the Expectation-Maximization algorithm ran for 901 rounds

 109283 SRR14016361.ke.tsv
  52636 SRR14016361.se.tsv
 161919 total
==> SRR14016361.ke.tsv <==
target_id	length	eff_length	est_counts	tpm
ENSMUST00000177564.1	16	7.66667	0	0
ENSMUST00000196221.1	9	2	0	0
ENSMUST00000179664.1	11	2.66667	0	0
ENSMUST00000178537.1	12	3.66667	0	0
ENSMUST00000178862.1	14	5.66667	0	0
ENSMUST00000179520.1	11	2.66667	0	0
ENSMUST00000179883.1	16	7.66667	0	0
ENSMUST00000195858.1	10	2.5	0	0
ENSMUST00000179932.1	12	3.66667	0	0

==> SRR14016361.se.tsv <==
ENSMUSG00000102693	0
ENSMUSG00000064842	0
ENSMUSG00000051951	0
ENSMUSG00000102851	0
ENSMUSG00000103377	0
ENSMUSG00000104017	0
ENSMUSG00000103025	0
ENSMUSG00000089699	0
ENSMUSG00000103201	0
ENSMUSG00000103147	0
SRR14016361 completed mapping pipeline successfully
