Digital Expression Explorer 2
Digital Expression Explorer 2 (DEE2) is a repository of uniformly processed RNA-seq data mined from public data obtained from NCBI Short
Hosted RNA-seq data
Select an organism of interest
More sophisticated keyword searches can be done at
GEO and SRA, to identify studies and accession
numbers of interest.
Keyword searches in mouse and human take up to a minute to complete.
Although all reasonable efforts have been taken to ensure the accuracy and reliability of the data,
Deakin and Monash Universities do not and cannot warrant the performance or results that may be obtained by
using this software or data. Deakin and Monash disclaim all warranties, express or implied, including
warranties of performance, merchantability or fitness for any particular purpose.
Ziemann M, Kaspi A, El-Osta A. Digital Expression Explorer 2: a repository of 4.5 trillion
uniformly processed RNA-seq reads and counting. ABACBS2018 DOI:10.5281/zenodo.1561839.
Ziemann M, Kaspi A, Lazarus R, El-Osta A. Digital Expression Explorer: A user-friendly repository of uniformly
processed RNA-seq data. ComBio2015 DOI:10.13140/RG.2.1.1707.5926
See our poster